Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I07
(756 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 169 8e-41
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 164 2e-39
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 162 1e-38
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 149 1e-34
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 145 9e-34
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 132 7e-30
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 124 2e-27
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 112 1e-23
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 109 1e-22
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 108 1e-22
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 107 2e-22
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 101 2e-20
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 99 6e-20
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 99 1e-19
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 95 1e-18
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 94 4e-18
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 87 6e-16
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 75 1e-12
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 69 2e-10
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 61 3e-08
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 59 1e-07
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 58 2e-07
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 55 2e-06
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 51 4e-05
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 50 8e-05
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 2e-04
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 46 8e-04
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 44 0.004
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 40 0.088
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 39 0.15
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 38 0.20
UniRef50_A3ITP2 Cluster: Efflux transporter, RND family, MFP sub... 35 1.9
UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, wh... 33 5.8
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 169 bits (410), Expect = 8e-41
Identities = 89/171 (52%), Positives = 107/171 (62%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KIS+GTIEI+++VH++K G+KVGASEATLL ML I PF+YGL + QVYDSG++FAP ILD
Sbjct: 146 KISRGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSILD 205
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXI 276
I +DL +F +G+ANVAA+SL IGYPT+AS PHSI NGFKNLL
Sbjct: 206 ITEDDLIKQFMSGLANVAAVSLQIGYPTVASVPHSIVNGFKNLLAVAVATDITFKEAEQA 265
Query: 275 KEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 123
K F+ DPS F SDDDMGFGLFD
Sbjct: 266 KAFVADPSAF---AALVPAAQEDKKEDDKAAAAAEESEEESDDDMGFGLFD 313
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 164 bits (398), Expect = 2e-39
Identities = 85/172 (49%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LD
Sbjct: 146 KISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXI 276
I E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +
Sbjct: 206 ITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKV 265
Query: 275 KEFIKDPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 123
K F+ DPS F SD+DMGFGLFD
Sbjct: 266 KAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 162 bits (393), Expect = 1e-38
Identities = 81/174 (46%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLN---ISPFSYGLVVKQVYDSGTIFAPE 465
KIS+GTIEI++DV ++KPGDKVGASEATLLNMLN ISPFSYGL+++QVYD+G++++PE
Sbjct: 146 KISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPE 205
Query: 464 ILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXX 285
+LDI + L +F GV N+A++ L IGYPT+AS PH+I NG+K +L
Sbjct: 206 VLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLA 265
Query: 284 XXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 123
+K ++ DP+ F SD+DMGFGLFD
Sbjct: 266 EKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 149 bits (360), Expect = 1e-34
Identities = 70/130 (53%), Positives = 92/130 (70%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI+KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F PE+L+
Sbjct: 149 KINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLN 208
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXI 276
+ +DL KF AGV+ + ALSLAI YPT+A+APH N +KN+L +
Sbjct: 209 LTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENV 268
Query: 275 KEFIKDPSKF 246
KEF+KDP+KF
Sbjct: 269 KEFLKDPTKF 278
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 145 bits (352), Expect = 9e-34
Identities = 67/130 (51%), Positives = 91/130 (70%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI+KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F+PE+LD
Sbjct: 148 KINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLD 207
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXI 276
+ + L KF +G++ V +L+LA+ YPT+A+APH N +KN L +
Sbjct: 208 LTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKV 267
Query: 275 KEFIKDPSKF 246
KEF+KDPSKF
Sbjct: 268 KEFLKDPSKF 277
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 132 bits (320), Expect = 7e-30
Identities = 62/104 (59%), Positives = 80/104 (76%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI++G I+I+N+VHI+K G KVGASEATLL LNI PF+YGL K +YD+G ++P I +
Sbjct: 145 KINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISE 204
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
EDL KF+ G+ N+AA+SL IGYPT+AS PHS+ N FKNLL
Sbjct: 205 ---EDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLL 245
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 124 bits (300), Expect = 2e-27
Identities = 60/129 (46%), Positives = 83/129 (64%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI KG I+I+N++H++ KVG SEA LL L + PFS+GL VK VYD+G++++ E+L
Sbjct: 156 KIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSVYSAEVLK 215
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXI 276
+ + L KF GV N+AA+SL +G PT ASAPHSI +GFKNL+ +
Sbjct: 216 LTNDILLGKFMNGVRNIAAMSLTLGIPTAASAPHSIVSGFKNLVSIAHVVDYTFSQAEGL 275
Query: 275 KEFIKDPSK 249
+KDPSK
Sbjct: 276 LAVLKDPSK 284
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 112 bits (269), Expect = 1e-23
Identities = 65/171 (38%), Positives = 86/171 (50%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI KG IEI VH++K G+KV AS ATLL N++P SYG+ V+ VYD G I+ ++LD
Sbjct: 147 KIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLD 205
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXI 276
I ED+ KF GV+NVAALS A G T AS PH FKN++ +
Sbjct: 206 ITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKIL 265
Query: 275 KEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 123
K+++++P F D MGFG+FD
Sbjct: 266 KKWVENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 109 bits (261), Expect = 1e-22
Identities = 63/104 (60%), Positives = 73/104 (70%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KISKGTIEIINDV ILK GDK+ +QVY G+IF+P+ILD
Sbjct: 744 KISKGTIEIINDVPILKSGDKI----------------------EQVY--GSIFSPDILD 779
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
IKPEDLRAKFQ GVAN+A +SL IGYPT+AS PH+IA GF+NLL
Sbjct: 780 IKPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNLL 823
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 108 bits (260), Expect = 1e-22
Identities = 51/103 (49%), Positives = 69/103 (66%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI KGTIEI + ++ G KVGASEA +LN+L I PF Y L ++ +YD G ++ P IL
Sbjct: 148 KIFKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILA 207
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 327
I E L KF+ G+ NV L+LA+GYP ASAPH + + FK++
Sbjct: 208 ITEEVLGEKFRTGLRNVTGLALAVGYPCAASAPHLVGSAFKDI 250
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 107 bits (258), Expect = 2e-22
Identities = 53/104 (50%), Positives = 71/104 (68%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI+K IEI D I+ G+KVG++EA LL LNI+PFSY L V V+D+G ++ P +LD
Sbjct: 164 KIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVYGPGVLD 223
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
I E + ++ ++NVA++SL G PT ASAPHSI FKNLL
Sbjct: 224 ITSESIIESYKRVISNVASVSLESGIPTRASAPHSIMRVFKNLL 267
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 101 bits (242), Expect = 2e-20
Identities = 48/104 (46%), Positives = 67/104 (64%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI+KG IEI ++ ++K G+KVG S+A LL L I+PF YG V+ VYD+G ++ + LD
Sbjct: 153 KITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKALD 212
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
+ D+ KFQ GV A+SLA PT A+ PH + N F+ LL
Sbjct: 213 LTESDIVKKFQEGVQAATAISLAANLPTEAACPHLMLNAFQALL 256
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 99 bits (238), Expect = 6e-20
Identities = 46/104 (44%), Positives = 67/104 (64%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI+KG +EII+ +L GDKVG S+A LL MLNI PF Y + + Q+Y+ G I+ ++D
Sbjct: 168 KITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLID 227
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
I ED+ + ++ VAA SL G T AS P+++ N FK++L
Sbjct: 228 IGEEDIFTSLRNAISTVAAASLGAGVITQASMPYNVRNAFKDIL 271
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 99.1 bits (236), Expect = 1e-19
Identities = 50/104 (48%), Positives = 67/104 (64%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI+KGT+EI++D +L GD+V S ATLL L+ISPF Y + V+ V+D G +F E L
Sbjct: 153 KIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLS 212
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
I + + G++NVAALSL G PT A+ PH I + FK LL
Sbjct: 213 ITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLL 256
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/103 (45%), Positives = 59/103 (57%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI KG IEI +V + G K+G SE +LL +NI PFSYG+ YD+G I E+L
Sbjct: 164 KIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLS 223
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 327
I P + F +AA+SLA GY T S PH I N FK+L
Sbjct: 224 ISPSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQNAFKDL 266
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 93.9 bits (223), Expect = 4e-18
Identities = 48/103 (46%), Positives = 64/103 (62%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI KG I+I D +LK G KVG S+A LL L PF YG+ V YD+G+I + +
Sbjct: 164 KIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVS 223
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 327
+ D+ AKFQ V NV+A+SL G+ ASAP+ +AN FK+L
Sbjct: 224 VNLNDIVAKFQQNVRNVSAISLQNGWVNEASAPYLLANAFKDL 266
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 86.6 bits (205), Expect = 6e-16
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI+KG IEI+N V+++K GD V S ATLL L I PF Y + +YD G I+ +L+
Sbjct: 147 KINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVLE 206
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL-XXXXXXXXXXXXXXX 279
I + AK+ AG+ +L+L +P + + PH + K+ +
Sbjct: 207 IDDSVMEAKWNAGLEAFVSLALGANFPCLPAIPHIFMDTAKSFIGAGVEADVTEIPLVKR 266
Query: 278 IKEFIKDPSKF 246
+KE + DPSKF
Sbjct: 267 VKEILADPSKF 277
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/128 (32%), Positives = 73/128 (57%)
Frame = +3
Query: 255 WVLNELLDGGSFFKLNLCDSSDGQKVLETIGNGMRG*SNSWVTNSQRKSSYISNSSLELG 434
WVLN +L +F+ + SD Q+VL + + WVT+SQ +S +S E+
Sbjct: 55 WVLNSVLQFFNFWVDVVSSDSDSQQVLVVVDQRVTDRWQGWVTSSQGNTSNGVDSRDEVR 114
Query: 435 TEIFWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDF 614
+ D+Q+ ++ + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+F
Sbjct: 115 DQFIVSDIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNF 174
Query: 615 NSTL*NLG 638
N T NLG
Sbjct: 175 NGTSGNLG 182
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/99 (33%), Positives = 57/99 (57%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
+I +G+I++++D + + G+ V + +L+ L I P GL ++ V+ G +F PE L+
Sbjct: 150 RIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELE 209
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANG 339
I ++ RA Q+ A+ LS+ YPT +AP IA G
Sbjct: 210 IDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKG 248
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/102 (31%), Positives = 49/102 (48%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
+I KG + I D +LK G+ + A +LN L I P GL V VY+ G ++ P++L
Sbjct: 148 RIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLA 207
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKN 330
I ++ Q + L++ I YPT + I F N
Sbjct: 208 IDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLN 249
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 58.8 bits (136), Expect = 1e-07
Identities = 36/99 (36%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = -2
Query: 416 VANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XX 240
V NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAA 60
Query: 239 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 123
SD+DMGFGLFD
Sbjct: 61 APVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 99
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/104 (28%), Positives = 46/104 (44%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
K+ G + ++ D + KPGD + A +L L I P L +K Y G + E L
Sbjct: 151 KVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAESLK 210
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
+ E R+ N L++ I YPT +I+ FKN +
Sbjct: 211 LDLEGYRSNITEAYRNAFTLAVEIAYPTPDVLKFTISKVFKNAI 254
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI KG IEII + +L+ G K+ +EATLL LNI PF + + Y++G + P +L+
Sbjct: 145 KILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGKSYDPSVLN 204
Query: 455 IKPEDLRAKFQAGVANVAAL 396
F+ ++++ +L
Sbjct: 205 FNESMFDKSFKDCLSSIESL 224
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/99 (29%), Positives = 45/99 (45%)
Frame = -2
Query: 632 ISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 453
I G + + + K G+ V AT+L+ L I P GL ++ YD GTI+ PE+L +
Sbjct: 150 IDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAV 209
Query: 452 KPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGF 336
+ N LS+ YPT A+ +A +
Sbjct: 210 DESKYFSDIIRAAQNAFNLSVNTAYPTGATIGTLLAKAY 248
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 49.6 bits (113), Expect = 8e-05
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = -2
Query: 632 ISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY-DSGTIFAP-EIL 459
+ GTI I D + KPGD + A+LL L I+P + +K Y S + P E L
Sbjct: 157 VKGGTIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAYIKSLNRWVPAEEL 216
Query: 458 DIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
+ + + Q N AL ++I YP S+A F++ L
Sbjct: 217 VLDLNKYKEQIQEAYTNALALGVSIAYPVPEVLKLSVAKAFQDAL 261
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/83 (37%), Positives = 41/83 (49%)
Frame = -2
Query: 632 ISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 453
I KG + + ++K G+ V A L L+I P GL VK + DSG I PE L I
Sbjct: 147 IEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETLAI 206
Query: 452 KPEDLRAKFQAGVANVAALSLAI 384
E + FQ A AL+LA+
Sbjct: 207 DTEKVLEDFQR--AYQMALNLAV 227
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 46.4 bits (105), Expect = 8e-04
Identities = 28/104 (26%), Positives = 48/104 (46%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI KG+I + +D I+ G+++ + A +L L I P G+ + V + TI+ ++L
Sbjct: 143 KIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPMEVGIDLLAVCEGDTIYTADVLA 202
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
I E+ + LS+ G SAP I ++ L
Sbjct: 203 IDEEETIQTLANAYQSAINLSVYAGILNSESAPLLIQKAARDAL 246
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
+ISK +IEII D+ ++ + S+ LL L+I P YG+ +K+++ S +IL
Sbjct: 141 RISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSSKGEINLKILQ 200
Query: 455 IKPEDL 438
+ +L
Sbjct: 201 MNNNNL 206
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 39.5 bits (88), Expect = 0.088
Identities = 26/95 (27%), Positives = 37/95 (38%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
++ G I I + + KPGD + A LL L I P G+ VK D G + ++L
Sbjct: 154 QVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLITEDLLR 213
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHS 351
E R L+ I Y + A S
Sbjct: 214 PDIEAFRGDVIDAAKEALGLATEIVYMPVPEAVES 248
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -2
Query: 632 ISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 453
I G ++I ++K G+ + A L L + P GL+++ Y TIF P++L I
Sbjct: 147 IEGGKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETIFTPDLLAI 206
Query: 452 KPE 444
E
Sbjct: 207 DEE 209
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 38.3 bits (85), Expect = 0.20
Identities = 25/104 (24%), Positives = 43/104 (41%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
+I +I I D + KPGD + A+LL L+I+ + +K YD G I + L
Sbjct: 150 RIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGIIILRDQLV 209
Query: 455 IKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 324
+ E+ + + + I +P S+ F+ L
Sbjct: 210 LDLEEYKNMVMNAHLDALKIGSEIAWPVPEILELSLNKAFRQAL 253
>UniRef50_A3ITP2 Cluster: Efflux transporter, RND family, MFP
subunit; n=1; Cyanothece sp. CCY 0110|Rep: Efflux
transporter, RND family, MFP subunit - Cyanothece sp.
CCY 0110
Length = 602
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = -2
Query: 635 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 456
KI++ ++IND ++ A+ + + + I G+V +++ D G + P +
Sbjct: 268 KIARLEAKVINDQAKVQQAKAKVATASVISSYTQIEAPVTGIVQERIVDPGMVVQPGMGI 327
Query: 455 IKPEDL-RAKFQAGVANVAALSLAIGYPTIASAP 357
+K D + + QA VA A + IG P +A P
Sbjct: 328 LKIGDYSQIRLQANVAQHDATKIRIGTPIVAKIP 361
>UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1153
Score = 33.5 bits (73), Expect = 5.8
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = -2
Query: 563 SEATLLNMLNISPF---SYGLVVKQVYDSGTIFAPEILDIKPEDLRA 432
+++ +LN +N F SYGL + + YD ++A ++L+I+P ++A
Sbjct: 265 NQSLVLNPINSKAFYLKSYGLRLTENYDEALVWADKVLEIEPNHIKA 311
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,389,835
Number of Sequences: 1657284
Number of extensions: 9335320
Number of successful extensions: 23924
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 23253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23911
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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