Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I04
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.52 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   6.4  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 215 DIESVPNASPVCE*SRCVAV-TFYRKDGRTL 126
           DI++ PN +P C+ + CV    F  +DG T+
Sbjct: 152 DIDNDPNRAPPCDPAVCVLPDCFCSEDGTTI 182


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 263 RPRSSGEASEDLGPSFDIESVPNASPVCE*SRCV 162
           +P    E+ E+   S  +E+ PN +P C+ ++CV
Sbjct: 138 KPDCKDESDEN---SCTVETDPNRAPDCDPTQCV 168


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 480 LHGDDAARRAEILQ 521
           LH DDA RRA+I++
Sbjct: 11  LHPDDAIRRAKIVK 24


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 480 LHGDDAARRAEILQ 521
           LH DDA RRA+I++
Sbjct: 11  LHPDDAIRRAKIVK 24


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 352 KATRASPVGCPRSL 393
           KA++ASP   PRS+
Sbjct: 205 KASKASPAAAPRSV 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,001
Number of Sequences: 336
Number of extensions: 1973
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)