Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I03
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   3.6  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   4.7  
AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein prot...    24   4.7  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 704 PKPYARWTRYRRRPSLCAS 760
           P P +RW R+RRR  L  S
Sbjct: 3   PLPQSRWWRWRRRHLLTGS 21


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 456 LLSPKIKHMCNKLIKYWGVIAR*HSCSIKP 545
           LLS  IK   + +I  WG+I+    C  KP
Sbjct: 531 LLSKVIKPRLDCIIGKWGIISTAQKCCNKP 560


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 672 TNVXYKSGRVLRNPMQGGP 728
           T   YK+G++  NP   GP
Sbjct: 53  TTAAYKAGKIAPNPFTAGP 71


>AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein
          protein.
          Length = 77

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 23 RNKIIWNVQTMFIYLI 70
          R K++W   T+FI+L+
Sbjct: 29 REKVLWTAITLFIFLV 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,328
Number of Sequences: 2352
Number of extensions: 17154
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)