Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H23
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   8.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 276 RTGLQGRTCQWSNTHC 323
           + G +G+TC   ++HC
Sbjct: 133 KNGWKGKTCSLKDSHC 148


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 318  AYSTIGRSXPGDPCEPQSK 262
            AY++IG   P D   P+++
Sbjct: 1469 AYNSIGTGDPSDTLNPRTR 1487


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 486 TATSGTLNFTKIYRLHKTGL 545
           T   GTL + ++   HK G+
Sbjct: 285 TENMGTLGYNELCEFHKNGI 304


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 415 PMFIVKAYLPVNESFGFT 362
           P F      P+N SF FT
Sbjct: 629 PTFTALGLFPINGSFAFT 646


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 30  YLVECDIFSCCLTCASAL 83
           Y +   IF CCL   SAL
Sbjct: 243 YQIILVIFDCCLETVSAL 260


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 285 LQGRTCQWSNTHCGKACP 338
           L G TCQ   TH    CP
Sbjct: 71  LNGATCQDHTTHYTCHCP 88



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 398 LHNEHRCTCHLGLF 439
           +H  H+CTC  G +
Sbjct: 356 IHAGHKCTCPEGFY 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,774
Number of Sequences: 336
Number of extensions: 4036
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)