Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H21
(792 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-l... 32 0.50
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 31 0.66
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 31 0.66
At3g09000.1 68416.m01053 proline-rich family protein 30 2.0
At5g32590.1 68418.m03867 myosin heavy chain-related similar to M... 29 3.5
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 29 3.5
At3g08670.1 68416.m01007 expressed protein 29 3.5
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 29 4.7
At3g55460.1 68416.m06159 SC35-like splicing factor, 30 kD (SCL30... 28 6.2
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 28 6.2
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 28 6.2
At5g49760.1 68418.m06163 leucine-rich repeat family protein / pr... 28 8.2
At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot... 28 8.2
>At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-like
SR protein (SRZ22) identical to RSZp22 protein
[Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like
SR protein [Arabidopsis thaliana] GI:3435094; contains
Pfam profiles PF00076: RNA recognition motif. (a.k.a.
RRM, RBD, or RNP domain) and PF00098: Zinc knuckle;
identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093
Length = 200
Score = 31.9 bits (69), Expect = 0.50
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = -1
Query: 750 DIRTWSCSXTVTMSRHPVAVRGGAHQ*ALRAHSRTLPIQ*R----GWRSQIRVYRSPRPA 583
D++ + C T +R RGG + ++ SRT P R G RS RSP P
Sbjct: 98 DLKCYECGETGHFARE-CRNRGGTGRRRSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPP 156
Query: 582 RDHEPVPPL---RSHPRSQTP 529
R P PP RS+ RS P
Sbjct: 157 RRRSPSPPPARGRSYSRSPPP 177
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 31.5 bits (68), Expect = 0.66
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = -3
Query: 595 PSP-GTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETP 419
P+P P RPA+ + ++ PT+ R+AS + + R+ S R E P
Sbjct: 85 PNPYSASPPPRPASPRVAS--PRPTSPRVASPRVPSPRAEVPRTLSPKPPSPRA---EVP 139
Query: 418 -SMTSGPPPPAGDSPRTGAPRRTCCRRWY*LSSRRRNAPRSTRPIAT 281
S++ PP P D PR+ +P+ + SS NAP + RP +T
Sbjct: 140 RSLSPKPPSPRADLPRSLSPKPFDRSK---PSSASANAPPTLRPAST 183
Score = 31.1 bits (67), Expect = 0.88
Identities = 34/123 (27%), Positives = 43/123 (34%), Gaps = 2/123 (1%)
Frame = -3
Query: 652 PDTAYPVERLAQSDTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S*ID 473
P T P S P RP + P A++ P + R T
Sbjct: 175 PPTLRPASTRVPSQRITPHSVPSPRPSS-PRGASPQAISSKPPSPRAEPPTLDTPRPPSP 233
Query: 472 RSRWTSTQSRRV-CTRETPSMTSGPPPPAGDSPRTGAPRRTCCRRWY*LSS-RRRNAPRS 299
R+ R+ R T T PP P D+PR APR T + S R +APR
Sbjct: 234 RAASLRADPPRLDAARPT---TPRPPSPLADAPRLDAPRPTTPKPPSPRSDPPRLDAPRP 290
Query: 298 TRP 290
T P
Sbjct: 291 TTP 293
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 433 TRETPSMTSGPPPPAGDSPRTGAPRRTCCRRWY*LSSRRRNAPRSTRP 290
T + P+ S PPP SPR +PR T R ++S R +PR+ P
Sbjct: 81 TPDRPNPYSASPPPRPASPRVASPRPTSPR----VASPRVPSPRAEVP 124
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 31.5 bits (68), Expect = 0.66
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = -3
Query: 595 PSP-GTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETP 419
P+P P RPA+ + ++ PT+ R+AS + + R+ S R E P
Sbjct: 84 PNPYSASPPPRPASPRVAS--PRPTSPRVASPRVPSPRAEVPRTLSPKPPSPRA---EVP 138
Query: 418 -SMTSGPPPPAGDSPRTGAPRRTCCRRWY*LSSRRRNAPRSTRPIAT 281
S++ PP P D PR+ +P+ + SS NAP + RP +T
Sbjct: 139 RSLSPKPPSPRADLPRSLSPKPFDRSK---PSSASANAPPTLRPAST 182
Score = 31.1 bits (67), Expect = 0.88
Identities = 34/123 (27%), Positives = 43/123 (34%), Gaps = 2/123 (1%)
Frame = -3
Query: 652 PDTAYPVERLAQSDTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S*ID 473
P T P S P RP + P A++ P + R T
Sbjct: 174 PPTLRPASTRVPSQRITPHSVPSPRPSS-PRGASPQAISSKPPSPRAEPPTLDTPRPPSP 232
Query: 472 RSRWTSTQSRRV-CTRETPSMTSGPPPPAGDSPRTGAPRRTCCRRWY*LSS-RRRNAPRS 299
R+ R+ R T T PP P D+PR APR T + S R +APR
Sbjct: 233 RAASLRADPPRLDAARPT---TPRPPSPLADAPRLDAPRPTTPKPPSPRSDPPRLDAPRP 289
Query: 298 TRP 290
T P
Sbjct: 290 TTP 292
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 433 TRETPSMTSGPPPPAGDSPRTGAPRRTCCRRWY*LSSRRRNAPRSTRP 290
T + P+ S PPP SPR +PR T R ++S R +PR+ P
Sbjct: 80 TPDRPNPYSASPPPRPASPRVASPRPTSPR----VASPRVPSPRAEVP 123
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = -3
Query: 592 SPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVCTRETPSM 413
S +R +RPA + T T +TSR + S S SR T T +R + P
Sbjct: 150 SGSSRSTSRPATPTRRSTTPTTSTSRPVTTRASNSRSSTPTSRATLTAARATTSTAAPRT 209
Query: 412 TSGPPPPAGDSPRTGAPRRT 353
T+ + S R+ P R+
Sbjct: 210 TT----TSSGSARSATPTRS 225
>At5g32590.1 68418.m03867 myosin heavy chain-related similar to
Myosin heavy chain, non-muscle (Zipper protein) (Myosin
II)(SP:Q99323) {Drosophila melanogaster}
Length = 761
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 460 TSTQSRRVCTRETPSMTSGPPPPAGDSPRTGA 365
T Q+ R PS + GPPPP SP +G+
Sbjct: 383 TRAQTDRSPRLSAPSRSMGPPPPVTVSPSSGS 414
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 652 PDTAYPVERLAQ-SDTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTS 494
P T+ P L SDT S +P P T P+A+ S + + P+ S AS + S
Sbjct: 661 PSTSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFPSASPSASPSAS 714
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 29.1 bits (62), Expect = 3.5
Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 5/146 (3%)
Frame = -3
Query: 613 DTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTSTQSRRVC 434
+T + S RP + + + SSA TPT + AS +++ SR S
Sbjct: 181 NTSSASVSSYIRPSSPSSRSSSSARPSTPTRTSSASRSST-------PSRIRPGSSSSSM 233
Query: 433 TRETPSMTSGPPPPAGDSPRTGA--PRRTCCRRWY*LSSRRRNAPRSTRPIAT*SAGSTL 260
+ PS++S P P P+ A P R S+ R +P ST AT S +
Sbjct: 234 DKARPSLSSRPSTPT-SRPQLSASSPNIIASRPNSRPSTPTRRSPSSTSLSAT-SGPTIS 291
Query: 259 GLRCANGDRT---LSRDTCQGDXRRS 191
G R A+ RT LSR + G R+
Sbjct: 292 GGRAASNGRTGPSLSRPSSPGPRVRN 317
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/91 (23%), Positives = 35/91 (38%)
Frame = -3
Query: 631 ERLAQSDTCISEPSPGTRPRTRPAATQSSALTDTPTTSRLASITTSRC*S*IDRSRWTST 452
E Q D + + + P+ R + + +T P + + S + + ++
Sbjct: 164 EEQKQPDLKATSQAASSNPQVRLQSKKPQLVTKEPISPKPLSSPRKQQQLQTETKEAKAS 223
Query: 451 QSRRVCTRETPSMTSGPPPPAGDSPRTGAPR 359
S+ T TP PPPP SP T A R
Sbjct: 224 VSQTKLTTLTPPGPPPPPPPPPPSPTTAAKR 254
>At3g55460.1 68416.m06159 SC35-like splicing factor, 30 kD (SCL30)
nearly identical to SC35-like splicing factor SCL30, 30
kD [Arabidopsis thaliana] GI:9843657;
Serine/arginine-rich protein/putative splicing factor,
Arabidopdis thaliana, EMBL:AF099940; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 262
Score = 28.3 bits (60), Expect = 6.2
Identities = 40/119 (33%), Positives = 51/119 (42%)
Frame = +3
Query: 39 SKARRHSLSRVRSG*PWCRSRARPRNHRPDQTTSRLSRRTYSPSSCFLSV*DLRLSP*QV 218
S+ R H SR RS RSR+ PR RP + SR R+YSP+ R P +
Sbjct: 147 SRDRSHGRSRSRS---ISRSRS-PR--RPSDSRSRYRSRSYSPAP------RRRGGPPRG 194
Query: 219 SLDNVLSPLAHLSPRVEPALHVAIGRVLLGAFRRRELS*YHLLQHVRRGAPVLGESPAG 395
D S ++ SP E A A R G RE Y + RRG + SP+G
Sbjct: 195 EEDENYSRRSY-SPGYEGAAAAAPDRDRNGDNEIREKPGYE-AEDRRRGGRAVSRSPSG 251
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 472 RSRWTSTQSRRVCTRETPSMTSGPPPPAGDSPRTGAPRR---TCCRRWY*LSSRRRNAP 305
R R + RR + S PPP SP G+PRR + RR L RRR+ P
Sbjct: 252 RRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPP 310
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 472 RSRWTSTQSRRVCTRETPSMTSGPPPPAGDSPRTGAPRR---TCCRRWY*LSSRRRNAP 305
R R + RR + S PPP SP G+PRR + RR L RRR+ P
Sbjct: 259 RRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPP 317
>At5g49760.1 68418.m06163 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 953
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = +1
Query: 340 TFCSTSDVEPRFSVSPQPVAEARSSLTASPVCRHA----GTVYWSSGTCRSSSNS 492
++CS FS P + + ASP CR A GT+Y+ S + NS
Sbjct: 403 SYCSAIQHNTSFSTLPTNCSPCEPGMEASPTCRCAYPFMGTLYFRSPSFSGLFNS 457
>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related protein
2 (PCAT2) contains Pfam domains PF02135: TAZ zinc finger
and PF00569: Zinc finger, ZZ type; identical to cDNA
p300/CBP acetyltransferase-related protein 2
GI:12597460
Length = 1691
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 578 TTNPSRRYAVIRAHRHPDYKPPSKYNDI 495
T S +YA + H+H D + PSKY ++
Sbjct: 790 TEAQSSQYAERKDHKHSDVRAPSKYFEV 817
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,494,653
Number of Sequences: 28952
Number of extensions: 393845
Number of successful extensions: 1689
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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