Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H19
         (808 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6C9I8 Cluster: Similar to sp|P41832 Saccharomyces cere...    36   1.6  
UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    34   3.7  

>UniRef50_Q6C9I8 Cluster: Similar to sp|P41832 Saccharomyces
            cerevisiae YNL271c BNI1 regulator of budding; n=1;
            Yarrowia lipolytica|Rep: Similar to sp|P41832
            Saccharomyces cerevisiae YNL271c BNI1 regulator of
            budding - Yarrowia lipolytica (Candida lipolytica)
          Length = 1851

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 22/70 (31%), Positives = 22/70 (31%)
 Frame = +1

Query: 373  PPXXPPXFFXXXKXGGPKXPXXXXXPPPGGXPTXGXXXGXXXKXFKXXXSPPXXXLLKXP 552
            PP  PP  F     GGP        PPP   P  G   G     F     PP       P
Sbjct: 1047 PPPPPPPMFT----GGPPPMFTGGPPPPPPPPPPGFTGGPPPPGFTGGPPPPGFTGGPPP 1102

Query: 553  PPKXTSXPXG 582
            PP     P G
Sbjct: 1103 PPPPPPLPPG 1112


>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC03138 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 156

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 25/77 (32%), Positives = 28/77 (36%)
 Frame = +1

Query: 355 PXFFFXPPXXPPXFFXXXKXGGPKXPXXXXXPPPGGXPTXGXXXGXXXKXFKXXXSPPXX 534
           P FF+  P  PP FF   K   P        PPPGG P      G     F     PP  
Sbjct: 27  PLFFYGAPPPPPPFFFNKKKRPP--------PPPGGPPP--PFGGGGFPPFFHFFPPPGG 76

Query: 535 XLLKXPPPKXTSXPXGG 585
            +    PP+    P GG
Sbjct: 77  GV---APPQGGGPPLGG 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,816,129
Number of Sequences: 1657284
Number of extensions: 3440936
Number of successful extensions: 2705
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2527
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)