Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H17
(816 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 315 3e-86
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 315 3e-86
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 315 3e-86
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 312 1e-85
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 312 1e-85
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 300 6e-82
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 213 9e-56
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 113 1e-25
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 111 4e-25
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 111 5e-25
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 111 5e-25
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 111 5e-25
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 111 7e-25
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 109 2e-24
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 109 2e-24
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 108 4e-24
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 5e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 49 3e-06
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.30
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.30
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.6
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.9
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.4
At1g68080.1 68414.m07777 expressed protein 28 6.4
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.4
At3g26855.1 68416.m03360 hypothetical protein 28 8.5
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 315 bits (773), Expect = 3e-86
Identities = 151/219 (68%), Positives = 170/219 (77%), Gaps = 3/219 (1%)
Frame = -2
Query: 782 PTYTNLI-FXSDRFXLDHCFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSL--PR 612
PTYTNL S DGALNV + L P H+ + + +
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN--LVPYPRIHFMLSSYAPVISAE 279
Query: 611 RPTHEQLSVAEITNACFEPANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKR 432
+ HEQLSVAEITN+ FEPA+ M KCDPRHGKYM CC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 252
TIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMY
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY 399
Query: 251 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 315 bits (773), Expect = 3e-86
Identities = 151/219 (68%), Positives = 170/219 (77%), Gaps = 3/219 (1%)
Frame = -2
Query: 782 PTYTNLI-FXSDRFXLDHCFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSL--PR 612
PTYTNL S DGALNV + L P H+ + + +
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN--LVPYPRIHFMLSSYAPVISAE 279
Query: 611 RPTHEQLSVAEITNACFEPANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKR 432
+ HEQLSVAEITN+ FEPA+ M KCDPRHGKYM CC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 252
TIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMY
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY 399
Query: 251 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 315 bits (773), Expect = 3e-86
Identities = 151/219 (68%), Positives = 170/219 (77%), Gaps = 3/219 (1%)
Frame = -2
Query: 782 PTYTNLI-FXSDRFXLDHCFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSL--PR 612
PTYTNL S DGALNV + L P H+ + + +
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN--LVPYPRIHFMLSSYAPVISAE 279
Query: 611 RPTHEQLSVAEITNACFEPANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKR 432
+ HEQLSVAEITN+ FEPA+ M KCDPRHGKYM CC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 252
TIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMY
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY 399
Query: 251 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 312 bits (767), Expect = 1e-85
Identities = 150/219 (68%), Positives = 168/219 (76%), Gaps = 3/219 (1%)
Frame = -2
Query: 782 PTYTNLI-FXSDRFXLDHCFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSL--PR 612
PTYTNL S DGA+NV + L P H+ + + +
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTN--LVPYPRIHFMLSSYAPVISAA 279
Query: 611 RPTHEQLSVAEITNACFEPANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKR 432
+ HEQLSV EITNA FEPA+ M KCDPRHGKYM CC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 252
T+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY
Sbjct: 340 TVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY 399
Query: 251 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 312 bits (767), Expect = 1e-85
Identities = 150/219 (68%), Positives = 168/219 (76%), Gaps = 3/219 (1%)
Frame = -2
Query: 782 PTYTNLI-FXSDRFXLDHCFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSL--PR 612
PTYTNL S DGA+NV + L P H+ + + +
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTN--LVPYPRIHFMLSSYAPVISAA 279
Query: 611 RPTHEQLSVAEITNACFEPANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKR 432
+ HEQLSV EITNA FEPA+ M KCDPRHGKYM CC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 252
T+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY
Sbjct: 340 TVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY 399
Query: 251 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 300 bits (737), Expect = 6e-82
Identities = 143/217 (65%), Positives = 163/217 (75%), Gaps = 3/217 (1%)
Frame = -2
Query: 782 PTYTNLI-FXSDRFXLDHCFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSL--PR 612
PTY+NL S DGA+NV + L P H+ + + +
Sbjct: 222 PTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTN--LVPYPRIHFMLSSYAPVISSA 279
Query: 611 RPTHEQLSVAEITNACFEPANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKR 432
+ HEQ SV EIT + FEP+N M KCDPRHGKYM CC++YRGDVVPKDVN A+A IK KR
Sbjct: 280 KAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 252
TIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY 399
Query: 251 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 141
+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 400 SKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 213 bits (521), Expect = 9e-56
Identities = 105/167 (62%), Positives = 120/167 (71%), Gaps = 3/167 (1%)
Frame = -2
Query: 782 PTYTNLI-FXSDRFXLDHCFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSL--PR 612
PTYTNL S DGALNV + L P H+ + + +
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN--LVPYPRIHFMLSSYAPVISAE 279
Query: 611 RPTHEQLSVAEITNACFEPANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKR 432
+ HEQLSVAEITN+ FEPA+ M KCDPRHGKYM CC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 431 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 291
TIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 113 bits (273), Expect = 1e-25
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHEQLS--VAEITNACFE 558
C G LN S + L P H+ + L R + + +S V E+T ++
Sbjct: 239 CSLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 296
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ I ++ K + FV+W P K +
Sbjct: 297 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCD 356
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 357 IPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 408
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 409 FTEAESNMNDLVSEYQQ 425
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 111 bits (268), Expect = 4e-25
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHEQLS--VAEITNACFE 558
C G LN S + L P H+ + L R + + +S V E+T ++
Sbjct: 239 CSLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 296
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ I I+ K + FV+W P K +
Sbjct: 297 SKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCD 356
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 357 IPP--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 408
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 409 FTEAESNMNDLVAEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 111 bits (267), Expect = 5e-25
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHE--QLSVAEITNACFE 558
C G LN S + L P H+ + L R + + L+V E+T ++
Sbjct: 238 CCLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWD 295
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 356 IPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 408 FTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 111 bits (267), Expect = 5e-25
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHE--QLSVAEITNACFE 558
C G LN S + L P H+ + L R + + L+V E+T ++
Sbjct: 238 CCLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWD 295
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 356 IPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 408 FTEAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 111 bits (267), Expect = 5e-25
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHE--QLSVAEITNACFE 558
C G LN S + L P H+ + L R + + L+V E+T ++
Sbjct: 238 CCLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWD 295
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 356 IPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 408 FTEAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 111 bits (266), Expect = 7e-25
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHEQ--LSVAEITNACFE 558
C G LN S + L P H+ + L R + + L+V E+T ++
Sbjct: 238 CCLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCD 355
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 356 IPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 408 FTEAESNMNDLVSEYQQ 424
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 109 bits (263), Expect = 2e-24
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHEQ--LSVAEITNACFE 558
C G LN S + L P H+ + L R + + LSV E+T ++
Sbjct: 238 CCLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWD 295
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 296 AKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVC- 354
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 355 ---DIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 408 FTEAESNMNDLVAEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 109 bits (262), Expect = 2e-24
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHEQ--LSVAEITNACFE 558
C G LN S + L P H+ + L R + + LSV E+T ++
Sbjct: 238 CCLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWD 295
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 296 AKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV-- 353
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 354 --CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 408 FTEAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 108 bits (260), Expect = 4e-24
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 2/197 (1%)
Frame = -2
Query: 731 CFFXXDGALNVTSPSSRXTXCLTPVSTSHWSRTRQSSLPRRPTHEQ--LSVAEITNACFE 558
C G LN S + L P H+ + L R + + L+V E+T ++
Sbjct: 238 CCLRFPGQLN--SDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
Query: 557 PANQMVKCDPRHGKYMTCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 378
N M DPRHG+Y+T ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC- 354
Query: 377 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 198
+ P G + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 355 ---DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 197 FSEAREDLAALEKDYEE 147
F+EA ++ L +Y++
Sbjct: 408 FTEAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 5e-07
Identities = 40/170 (23%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Frame = -2
Query: 632 RQSSLPRRPTHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMTCCMLYRGDVVPKD 468
RQ+++ R+ T V ++ + N MV R+ KY++ + +G+V P
Sbjct: 280 RQANVIRKTT-----VLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQ 334
Query: 467 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 288
V+ ++ I+ ++ + F+DW P +V ++ + P V ++ + ML++ T+I
Sbjct: 335 VHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIRHL 389
Query: 287 WARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 150
++R ++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 390 FSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/170 (22%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Frame = -2
Query: 632 RQSSLPRRPTHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMTCCMLYRGDVVPKD 468
RQ+++ R+ T V ++ + N MV R+ KY++ + +G+V P
Sbjct: 280 RQANVIRKTT-----VLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQ 334
Query: 467 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 288
V+ ++ I+ ++ + F++W P +V ++ + P V ++ + ML++ T+I
Sbjct: 335 VHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL-----MLASHTSIRHL 389
Query: 287 WARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 150
+++ ++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 390 FSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 280 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 173
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 456 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 563
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 375 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 479
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 152 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 268
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 491 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 348
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 417 DELDSTLGFDGSDGRVHILGYDVTTVQ 497
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +2
Query: 65 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 226
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 227 TSA 235
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 259 SCTPSVLSCTGTSVRVWRRESSPK 188
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,233,786
Number of Sequences: 28952
Number of extensions: 358400
Number of successful extensions: 1365
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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