Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H16
         (875 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q64U79 Cluster: Putative uncharacterized protein; n=2; ...    36   1.8  
UniRef50_Q7RAS7 Cluster: Putative uncharacterized protein PY0642...    35   2.4  

>UniRef50_Q64U79 Cluster: Putative uncharacterized protein; n=2;
           Bacteroides fragilis|Rep: Putative uncharacterized
           protein - Bacteroides fragilis
          Length = 236

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +3

Query: 213 KLNRLMLSISMLTNAQLTIAFTKNTKCTFFLQNQAHVSLTRACATAD 353
           K+  LM++ ++L  A    A  +N  C FF  NQ    +TR C TAD
Sbjct: 2   KIRNLMVAATLLVTAG---AMAQNQDCAFFFPNQEGEQITRNCYTAD 45


>UniRef50_Q7RAS7 Cluster: Putative uncharacterized protein PY06422;
            n=13; Eukaryota|Rep: Putative uncharacterized protein
            PY06422 - Plasmodium yoelii yoelii
          Length = 2649

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +2

Query: 83   GTHNYLNYSANYELTNLQSLKQLNTYRTLRSSHSVRE*SIRYRKTESTDVINLHVNK 253
            G  ++ NY  N    N  ++ ++N Y     S+++    +  + TES   +N +VNK
Sbjct: 1600 GNESFNNYEVNNNEHNYTNMNKINAYSNSHLSNNIESEHVSVQNTESLQNVNKYVNK 1656


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,499,650
Number of Sequences: 1657284
Number of extensions: 11073169
Number of successful extensions: 27398
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27384
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)