Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H15
         (792 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10198| Best HMM Match : MBT (HMM E-Value=0)                         31   1.4  
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)                   30   2.5  
SB_26971| Best HMM Match : Peptidase_C5 (HMM E-Value=0.13)             28   10.0 

>SB_10198| Best HMM Match : MBT (HMM E-Value=0)
          Length = 753

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 216 SETSNNQSSNITVTII*KILLCINIFHTEEVSIRKQCQSEPEIS 347
           +E      ++I  T+  K+L+C N+F   +V++ K+C   P  S
Sbjct: 587 AEKEKKTFASILKTLTTKLLVCQNVFSLSKVALCKRCDISPSAS 630


>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
          Length = 968

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 587 PVSPRHHTKKTRTATSLMPSPTAR 516
           PV+PR HT+ T T T   P+PT R
Sbjct: 763 PVNPRLHTQYTHTYTPGTPTPTQR 786



 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 587 PVSPRHHTKKTRTATSLMPSPTARARLK 504
           PV PR HT+ T   T   PSPT R   +
Sbjct: 802 PVHPRLHTEYTHAYTPSTPSPTHRVHTR 829


>SB_26971| Best HMM Match : Peptidase_C5 (HMM E-Value=0.13)
          Length = 553

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 397 QAVAQYLQNRYKSVHKTEISGSDWH 323
           +A  Q L N  KS H+T ++GS WH
Sbjct: 121 KAYFQALLNLSKSAHETYLAGSMWH 145


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,662,000
Number of Sequences: 59808
Number of extensions: 407691
Number of successful extensions: 1037
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)