Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H14
(791 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 278 3e-75
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 278 3e-75
SB_56| Best HMM Match : Actin (HMM E-Value=0) 278 3e-75
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 278 4e-75
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 277 1e-74
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 276 1e-74
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 246 2e-65
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 2e-20
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 85 5e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 83 3e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 4e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.007
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 31 1.4
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.5
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.3
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 7.5
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 10.0
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 28 10.0
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 28 10.0
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 278 bits (682), Expect = 3e-75
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 205 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 264
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 265 GTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 324
Query: 338 YDESGPSIVHRKCF 297
YDESGP+IVHRKCF
Sbjct: 325 YDESGPAIVHRKCF 338
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEM T ASSSSLEKSY+ P
Sbjct: 186 FEQEMQTAASSSSLEKSYELP 206
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 278 bits (682), Expect = 3e-75
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
G+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEM T ASSSSLEKSY+ P
Sbjct: 224 FEQEMETAASSSSLEKSYELP 244
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 278 bits (682), Expect = 3e-75
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 242 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 301
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
G+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 302 GSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEM T ASSSSLEKSY+ P
Sbjct: 223 FEQEMQTAASSSSLEKSYELP 243
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 278 bits (681), Expect = 4e-75
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
G+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEM T ASSSSLEKSY+ P
Sbjct: 224 FEQEMTTAASSSSLEKSYELP 244
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 277 bits (678), Expect = 1e-74
Identities = 127/134 (94%), Positives = 132/134 (98%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTV+SG
Sbjct: 216 LPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSG 275
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
GTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 276 GTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 335
Query: 338 YDESGPSIVHRKCF 297
YDESGP+IVHRKCF
Sbjct: 336 YDESGPAIVHRKCF 349
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEM T ASSSS+EKSY+ P
Sbjct: 197 FEQEMQTAASSSSIEKSYELP 217
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 276 bits (677), Expect = 1e-74
Identities = 127/134 (94%), Positives = 132/134 (98%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 242 LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 301
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
G+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 302 GSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 338 YDESGPSIVHRKCF 297
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -2
Query: 754 FEQEMATXASSSSLEKSYDFP 692
FEQEMAT A+SSSLEKSY+ P
Sbjct: 223 FEQEMATAAASSSLEKSYELP 243
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 246 bits (602), Expect = 2e-65
Identities = 111/134 (82%), Positives = 123/134 (91%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIRKDLY+N VLSG
Sbjct: 16 LPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSG 75
Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 339
G+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+E
Sbjct: 76 GSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEE 135
Query: 338 YDESGPSIVHRKCF 297
Y E GP IVHRKCF
Sbjct: 136 YHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 96.7 bits (230), Expect = 2e-20
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 29/158 (18%)
Frame = -1
Query: 710 EVLRLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 531
E LPDG+V+ + ERF PEALFQP + +E G+ E +N+I D+D R + Y +
Sbjct: 242 EQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 530 VLSGGTTMYPGIADRMQKEITAL---------------------APST-----MKIKI-I 432
VLSGG+TMYPG+ R+++EI L P T K KI I
Sbjct: 302 VLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRI 361
Query: 431 APP-ERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 324
P RK+ V++GG++LA + W++++EY+E G
Sbjct: 362 EDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.4 bits (202), Expect = 5e-17
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Frame = -1
Query: 680 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 504
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 503 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 372
R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 371 TFQQMWISKQEYDESGPSIVHRKCF*THR 285
F + +K +YDE GPSI F HR
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
LPDGQ I IG+ERFR E LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2287 LPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -1
Query: 620 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 441
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 440 KII---APPERKYSVWIGGSILASL 375
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -1
Query: 584 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 429
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 428 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 330
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 581 SIMKCDVDIRKDLYANTVLSGGTTMYPG 498
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 650 PEALFQPSFLGMEACGIHET 591
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 698 LPDGQVITIGNERFRCPEALFQPSFL 621
LPDGQ+I+IG E E LF+P L
Sbjct: 873 LPDGQMISIGYECISSMEPLFRPDLL 898
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 388 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 561
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 562 TS 567
S
Sbjct: 815 AS 816
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 682 SSPSETKDSVAQRLSSNPRSWVWK 611
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 415 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 296
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 373 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 263
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 536 NTVLSGGTTMYPGIADRMQKEITALAP 456
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 370 PSNKCGSRNKSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 251
P N+ G++ + +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 776 SCXTSLXLRAGDGHRCIQQLPREVLRLPDGQVITIGNERFRC 651
SC ++ L GDGH C E P G T+ N+ + C
Sbjct: 829 SCSCNI-LYTGDGHTCTDLCSAENSCAPIGSSCTLTNDSYTC 869
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 397 VDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSA-SKRTA 284
VD+S P SLP+ K G + S P GS+ SK TA
Sbjct: 1939 VDKSEPGSLPTVKFGVTTTADASSMPKFQFGSSGSKDTA 1977
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 682 SSPSETKDSVAQRLSSNPRSWVWK 611
S+ SETK SV +R + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 682 SSPSETKDSVAQRLSSNPRSWVWK 611
S+ SETK SV +R + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 682 SSPSETKDSVAQRLSSNPRSWVWK 611
S+ SETK SV +R + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,057,447
Number of Sequences: 59808
Number of extensions: 518851
Number of successful extensions: 1589
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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