Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H14
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             249   2e-68
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.81 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.9  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  249 bits (610), Expect = 2e-68
 Identities = 116/117 (99%), Positives = 117/117 (100%)
 Frame = -1

Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 519
           LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 17  LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 76

Query: 518 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 348
           GTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSILASLSTFQQMWIS
Sbjct: 77  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWIS 133



 Score = 33.1 bits (72), Expect = 0.003
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 745 EMATXASSSSLEKSYDFP 692
           EMAT ASSSSLEKSY+ P
Sbjct: 1   EMATAASSSSLEKSYELP 18


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -1

Query: 584 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 405
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396

Query: 404 WI 399
           WI
Sbjct: 397 WI 398


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = -1

Query: 728 IQQLPREVL-RLPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 552
           ++ LP+ +  RL    V+ +   R    + + + +FLG+    +   +YN +   D  + 
Sbjct: 297 LRDLPKGIFTRLEQLLVLNLAGNRLGS-DRVDETTFLGLIRLIVLNLSYNMLTHIDARMF 355

Query: 551 KDLYANTVL 525
           KDL+   +L
Sbjct: 356 KDLFFLQIL 364


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 531 RIVRWYHHVPWNRRPYAK 478
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 531 RIVRWYHHVPWNRRPYAK 478
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 742 MATXASSSSLEKSYDFPTVRSSPSETKDSVA 650
           +A  + SSS+ K  D    +S  S  KDS A
Sbjct: 475 VAVVSKSSSINKLEDLRNKKSCHSGYKDSFA 505


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 742 MATXASSSSLEKSYDFPTVRSSPSETKDSVA 650
           +A  + SSS+ K  D    +S  S  KDS A
Sbjct: 475 VAVVSKSSSINKLEDLRNKKSCHSGYKDSFA 505


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 742 MATXASSSSLEKSYDFPTVRSSPSETKDSVA 650
           +A  + SSS+ K  D    +S  S  KDS A
Sbjct: 475 VAVVSKSSSINKLEDLRNKKSCHSGYKDSFA 505


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,252
Number of Sequences: 438
Number of extensions: 4749
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)