Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H07
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   6.3  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   8.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +2

Query: 665 IILTDHGWQEGFHRPXMCXNVDIE 736
           ++ T H    GFH P  C    +E
Sbjct: 484 VLYTIHMGYHGFHNPFTCNMCGVE 507


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 659 MTIILTDHGWQEGFHRPXMCXNVD 730
           M + +     QEG+H P +C  +D
Sbjct: 184 MAVPIAKFRLQEGYHVPELCELLD 207


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 77  GNGNHSPSGGP 45
           G+GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 650 GHYMTIILTDHGWQEGFHRPXMCXNVDI 733
           GH +TI ++     + +  P M  NVD+
Sbjct: 171 GHLLTIAVSAIPIDDAYDIPGMSENVDV 198


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 644 SDGHYMTIILTDHGWQEGFH 703
           SD H  TI+ + H +Q  FH
Sbjct: 84  SDKHGFTILNSMHKYQPRFH 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,905
Number of Sequences: 336
Number of extensions: 3881
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)