Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H07
(778 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 77 2e-14
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 70 2e-12
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 70 2e-12
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 49 5e-06
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 43 3e-04
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 42 6e-04
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 41 0.001
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_39444| Best HMM Match : SAC3_GANP (HMM E-Value=0.68) 30 2.4
SB_47216| Best HMM Match : Oxidored_molyb (HMM E-Value=0) 29 3.2
SB_24394| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_6201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 28 7.3
SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12) 28 9.7
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = -1
Query: 748 IQXTFDVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGFD 569
+ TF VN AH WT++ F+P+M+ +N GHIV+IAS+AG+ G+ VDYC+SK AA G
Sbjct: 136 VMRTFQVNSLAHIWTIQRFIPSMMEKNRGHIVSIASVAGYFGLVGCVDYCASKFAAVGLI 195
Query: 568 EA 563
EA
Sbjct: 196 EA 197
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 558 RVELETKGVKGVKTSLICPYFIRSTGMFEEVNSRF 454
R E+ G G++ + ICP+F +TGMF V ++
Sbjct: 199 RREIHGLGKMGIEFTTICPHF-TATGMFAGVKLKY 232
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 14/82 (17%)
Frame = -1
Query: 766 DSRPPSIQXTFDVNIXAHXW--------------TVKAFLPTMISQNDGHIVTIASMAGH 629
D+ IQ T +VN AH W TVK+FLP+M+++N GH+V IAS AG
Sbjct: 148 DTEDWMIQKTMEVNTMAHFWILALNPDYIVFTLQTVKSFLPSMLAKNHGHVVNIASSAGF 207
Query: 628 VGVAKLVDYCSSKAAACGFDEA 563
GV + DYCSSK A GFDE+
Sbjct: 208 FGVPGMCDYCSSKFGAVGFDES 229
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -2
Query: 558 RVELETKGVKGVKTSLICPYFIRSTGMFEEVNSRF 454
R+EL + G GVKT+++CPY+I +TGMF+ V +RF
Sbjct: 231 RMELSSLGKTGVKTTVVCPYYI-NTGMFDGVKTRF 264
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = -1
Query: 766 DSRPPSIQXTFDVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKA 587
D IQ ++N+ AH WT ++FL M+ QN GHIVTI+S++G A V+YC+SK
Sbjct: 1317 DQTDAQIQKAIELNLLAHFWTSRSFLGRMLEQNQGHIVTISSVSGSFPTAFQVEYCASKY 1376
Query: 586 AACGFDEA 563
A GF +A
Sbjct: 1377 GAVGFHDA 1384
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = -1
Query: 748 IQXTFDVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGFD 569
++ TF+ N KA +P M S + GHI+ I+S AGH G+ YC+SK A G
Sbjct: 108 VKETFNTNFFGVLRMSKAVIPRMKSDHSGHIINISSTAGHTGMPFTGLYCASKFAVEGLS 167
Query: 568 EA 563
E+
Sbjct: 168 ES 169
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -1
Query: 736 FDVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGFDEA 563
F+ N + VK LP M Q DG I+ +++ AG +G+ YC++K A GF E+
Sbjct: 330 FETNTMSVIELVKVVLPVMKKQQDGRIIVVSNQAGIMGIPFHDIYCATKFAVEGFLES 387
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -1
Query: 733 DVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGF 572
D+N A KA LP MI + +GHIV +S+AG +G Y ++K A G+
Sbjct: 159 DLNFLAVVSLTKAVLPHMIERKNGHIVVTSSVAGKIGAPMSTSYNATKFAVQGY 212
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = -1
Query: 751 SIQXTFDVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGF 572
+I F+ N+ A +P M Q GH+V I S+ G VG YC+SK A G+
Sbjct: 138 AINKVFEPNVYGLMRMTNAVIPHMKKQRAGHVVNIGSVLGIVGTPFSEIYCASKFAVEGY 197
Query: 571 DEA 563
EA
Sbjct: 198 AEA 200
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = -1
Query: 733 DVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGFDEA 563
DVN+ +++FLP MI G IV +S G G AK+ YC++K G A
Sbjct: 109 DVNLKGSANVIRSFLPKMIKAGKGVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRA 165
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = -1
Query: 748 IQXTFDVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGFD 569
+Q FDVN+ KAFLP ++ ++ G IV +AS AG + L Y +SK A F
Sbjct: 648 MQRVFDVNVWGLLNVTKAFLP-LLKKSCGRIVNVASCAGKLPGPGLSAYSASKYAVQSFS 706
Query: 568 EA 563
+A
Sbjct: 707 DA 708
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -1
Query: 748 IQXTFDVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGFD 569
++ F+VN KA +P M GHI+ I S+ G GV YCSSK A G
Sbjct: 301 VREMFNVNFFGVVRLTKAVIPKMKGNPSGHIINIPSIGGIRGVPFNAIYCSSKFAVEGMA 360
Query: 568 EA 563
E+
Sbjct: 361 ES 362
>SB_39444| Best HMM Match : SAC3_GANP (HMM E-Value=0.68)
Length = 794
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 421 SATSXRIQLWHEP*VNLFKHARRSNEVRTYQR 516
S T R LW E + +F RRSNE+RTY++
Sbjct: 71 SPTKRRETLWPEQKLTVF--GRRSNEIRTYEQ 100
>SB_47216| Best HMM Match : Oxidored_molyb (HMM E-Value=0)
Length = 672
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 633 DTWVLPSWSTTVRQKL-LPAASTRLFRVELETKGVKGVKTSL 511
D+++ P+ VR L +P +L+R+E+ +GV+ +K SL
Sbjct: 323 DSYITPNELFFVRNHLPVPVIDPKLYRIEVTGEGVRTIKLSL 364
>SB_24394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 1 LFFFFLFAHVGRQAYGPPDGE 63
LF HVGRQ +G PDG+
Sbjct: 7 LFSLLFVVHVGRQVHGAPDGD 27
>SB_6201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 293 PDAVPVAPNARIETPSSAPKIDMKTDSRPMSLLPPARHDR 174
P + P+ P ++PSS+P + P S LPP R
Sbjct: 88 PSSSPLLPRIDADSPSSSPLLPRVDADSPSSSLPPPPQGR 127
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -1
Query: 751 SIQXTFDVNIXAHXWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAA 581
SI+ T DVN+ K FLP ++ + G +V + S G + + + S + +A
Sbjct: 142 SIKQTADVNLWGLIDVTKTFLP-LLKKAKGRVVNMGSSCGAEEMLRFDTFASPETSA 197
>SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12)
Length = 642
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 251 PSSAPKIDMKTDSRPMSLLPPAR 183
P + P +D+K D RP+SL P R
Sbjct: 240 PKTKPVLDLKKDLRPISLTPGIR 262
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,216,001
Number of Sequences: 59808
Number of extensions: 489303
Number of successful extensions: 1422
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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