Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_H06
(824 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 86 3e-17
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 86 3e-17
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 86 3e-17
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 83 4e-16
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 83 4e-16
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 47 2e-09
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 55 6e-08
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 43 3e-04
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 43 3e-04
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 43 3e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 43 3e-04
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 43 3e-04
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 43 3e-04
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 43 3e-04
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 43 3e-04
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 43 3e-04
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 30 2.0
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 86.2 bits (204), Expect = 3e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -2
Query: 712 TAMFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQY 593
TAMFRRKAFLH YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
Score = 34.7 bits (76), Expect = 0.092
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -1
Query: 824 NVKPPVXXIPPXGLKMXATFIG 759
NVK V IPP GLKM ATFIG
Sbjct: 348 NVKTAVCDIPPRGLKMSATFIG 369
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3
Query: 756 STAIQELFKRISEQ 715
STAIQELFKRISEQ
Sbjct: 371 STAIQELFKRISEQ 384
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 86.2 bits (204), Expect = 3e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -2
Query: 712 TAMFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQY 593
TAMFRRKAFLH YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 331 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 370
Score = 34.7 bits (76), Expect = 0.092
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -1
Query: 824 NVKPPVXXIPPXGLKMXATFIG 759
NVK V IPP GLKM ATFIG
Sbjct: 293 NVKTAVCDIPPRGLKMSATFIG 314
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3
Query: 756 STAIQELFKRISEQ 715
STAIQELFKRISEQ
Sbjct: 316 STAIQELFKRISEQ 329
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 86.2 bits (204), Expect = 3e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -2
Query: 712 TAMFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQY 593
TAMFRRKAFLH YTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
Score = 34.7 bits (76), Expect = 0.092
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -1
Query: 824 NVKPPVXXIPPXGLKMXATFIG 759
NVK V IPP GLKM ATFIG
Sbjct: 348 NVKTAVCDIPPRGLKMSATFIG 369
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3
Query: 756 STAIQELFKRISEQ 715
STAIQELFKRISEQ
Sbjct: 371 STAIQELFKRISEQ 384
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 82.6 bits (195), Expect = 4e-16
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -2
Query: 712 TAMFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQY 593
TAMFRRKAFLH YTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 151 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 190
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 824 NVKPPVXXIPPXGLKMXATFIG 759
NVK V I P GLKM ATF+G
Sbjct: 113 NVKTTVCDIAPKGLKMAATFVG 134
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 82.6 bits (195), Expect = 4e-16
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -2
Query: 712 TAMFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQY 593
TAMFRRKAFLH YTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 213 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 252
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 824 NVKPPVXXIPPXGLKMXATFIG 759
NVK V I P GLKM ATF+G
Sbjct: 175 NVKTTVCDIAPKGLKMAATFVG 196
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 47.2 bits (107), Expect(2) = 2e-09
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2
Query: 709 AMFRRKAFLHXYTGEGMDEMEFTEAESN 626
AMFRR+AFLH YT EGMD +EFTE + N
Sbjct: 206 AMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 32.7 bits (71), Expect(2) = 2e-09
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -2
Query: 646 FTEAESNMNDLVSEYQQY 593
+ A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
MFRR+AFLH YT EGMD +F EA++++ DL+S YQQ
Sbjct: 293 MFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 196 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 382 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 96 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 550 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 335 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 769 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 1178 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 383 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 814 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 363 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 831 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 983 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 323 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 196 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 311 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -2
Query: 706 MFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
M+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = -2
Query: 703 FRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEYQQ 596
+ ++AF+H Y GEGM+E EF+EA ++ L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 748 HPGAVQAHLGTVTAMFRRKAFLHXYTGEGMDEMEFTEAESNMNDLVSEY 602
H G + +G MF +A++H Y G+ E F ++ + + +V Y
Sbjct: 423 HVGPLSKVVGKAWTMFASRAYVHQYLRFGISEDAFVDSFACLEQVVKNY 471
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,840,290
Number of Sequences: 59808
Number of extensions: 375888
Number of successful extensions: 905
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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