Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_H05
         (836 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g16460.2 68416.m02097 jacalin lectin family protein contains ...    31   1.3  
At3g16460.1 68416.m02098 jacalin lectin family protein contains ...    31   1.3  
At1g20130.1 68414.m02518 family II extracellular lipase, putativ...    29   3.8  
At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00...    29   5.1  

>At3g16460.2 68416.m02097 jacalin lectin family protein contains
           Pfam profile: PF01419 jacalin-like lectin domain;
           similar to myrosinase binding protein [Brassica napus]
           GI:1711296, GI:1655824, myrosinase-binding protein
           homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
           profile PF01419 jacalin-like lectin family
          Length = 647

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/46 (43%), Positives = 20/46 (43%)
 Frame = +2

Query: 455 TGTCFSMWTGYGLSTGMLTGNGTAXSTGYGMCFSXG*GAXXGTXXG 592
           TGT     TG G  TG  TG GT   TG G     G G   GT  G
Sbjct: 138 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-----GTGTGTGTGTG 178



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 20/46 (43%), Positives = 21/46 (45%)
 Frame = +2

Query: 455 TGTCFSMWTGYGLSTGMLTGNGTAXSTGYGMCFSXG*GAXXGTXXG 592
           TGT     TG G  TG  TG GT   TG G   + G G   GT  G
Sbjct: 189 TGTGTGTGTGTGTGTGTGTGTGTG-GTGTG-TGTGGTGTGTGTGTG 232


>At3g16460.1 68416.m02098 jacalin lectin family protein contains
           Pfam profile: PF01419 jacalin-like lectin domain;
           similar to myrosinase binding protein [Brassica napus]
           GI:1711296, GI:1655824, myrosinase-binding protein
           homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
           profile PF01419 jacalin-like lectin family
          Length = 705

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/46 (43%), Positives = 20/46 (43%)
 Frame = +2

Query: 455 TGTCFSMWTGYGLSTGMLTGNGTAXSTGYGMCFSXG*GAXXGTXXG 592
           TGT     TG G  TG  TG GT   TG G     G G   GT  G
Sbjct: 138 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-----GTGTGTGTGTG 178



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 20/46 (43%), Positives = 21/46 (45%)
 Frame = +2

Query: 455 TGTCFSMWTGYGLSTGMLTGNGTAXSTGYGMCFSXG*GAXXGTXXG 592
           TGT     TG G  TG  TG GT   TG G   + G G   GT  G
Sbjct: 189 TGTGTGTGTGTGTGTGTGTGTGTG-GTGTG-TGTGGTGTGTGTGTG 232


>At1g20130.1 68414.m02518 family II extracellular lipase, putative
           contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
          Length = 1006

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/45 (35%), Positives = 17/45 (37%)
 Frame = -3

Query: 591 PXXVPXXAPYPXEKHIPYPVXKAVPFPVNIPVDRPYPVHIEKHVP 457
           P   P  AP P  K  P P  K VP P       P P  +  H P
Sbjct: 73  PKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPVPPHGP 117


>At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00646
           F-box domain
          Length = 435

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -3

Query: 591 PXXVPXXAPYPXEKHIPYPVXKAVPFPVNIPVDRPYPVHIEKHVPV 454
           P  +P   P     H+  P+  A+P P+ I +  P P+ +   +P+
Sbjct: 358 PMPMPMPMPMHMHMHMHMPMPMAMPMPMPIAMAMPMPMPMPMPMPM 403


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,509,305
Number of Sequences: 28952
Number of extensions: 121416
Number of successful extensions: 414
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)