Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_G22
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   4.0  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
 Frame = -1

Query: 335 CGVVYHMC---ILIRVCYML 285
           CG+ YH+C   I   VC+M+
Sbjct: 154 CGIQYHICNTVISATVCFMM 173


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
 Frame = -1

Query: 335 CGVVYHMC---ILIRVCYML 285
           CG+ YH+C   I   VC+M+
Sbjct: 150 CGIQYHICNTVISATVCFMM 169


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 250 SDLIFDKIISSTKGCF*ICAVATLKTGALIF 158
           S+LI  KI+S     F + +  T+   +LIF
Sbjct: 11  SELITSKIVSFVNSIFLVMSAVTIILSSLIF 41


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 328 WFIICVY*LGFVTCSRSFEVCPSLY 254
           +FII +Y L  +T S +  VC + Y
Sbjct: 43  YFIIAIYVLTILTSSVTLHVCFNSY 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,984
Number of Sequences: 336
Number of extensions: 3281
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)