Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_G22
         (836 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g43250.1 68415.m05375 expressed protein  and genefinder             30   2.2  
At3g11670.2 68416.m01431 digalactosyldiacylglycerol synthase 1 (...    29   5.1  
At3g11670.1 68416.m01430 digalactosyldiacylglycerol synthase 1 (...    29   5.1  

>At2g43250.1 68415.m05375 expressed protein  and genefinder
          Length = 625

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +2

Query: 380 SSRCHVQFRRASVTR*IYTLHSGHLQNGHKIFHTSIRVLFRCSVVGVFKEAK 535
           SSR  VQF + S     Y L +  L+N  K F   + ++  CS+ G+ K  K
Sbjct: 336 SSRTEVQFSQLSSEDKSYALMADLLRNQAKKFKNIVAIVDACSLAGLRKHWK 387


>At3g11670.2 68416.m01431 digalactosyldiacylglycerol synthase 1
           (DGD1) / MGDG:MGDG galactosyltransferase / galactolipid
           galactosyltransferase identical to
           digalactosyldiacylglycerol synthase (DGD1) GI:5354158
           [Arabidopsis thaliana]
          Length = 639

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +3

Query: 609 VDHVNDWVVRFFLDRALR 662
           V+HVN+WV R + D+ LR
Sbjct: 508 VNHVNNWVTRAYCDKVLR 525


>At3g11670.1 68416.m01430 digalactosyldiacylglycerol synthase 1
           (DGD1) / MGDG:MGDG galactosyltransferase / galactolipid
           galactosyltransferase identical to
           digalactosyldiacylglycerol synthase (DGD1) GI:5354158
           [Arabidopsis thaliana]
          Length = 808

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +3

Query: 609 VDHVNDWVVRFFLDRALR 662
           V+HVN+WV R + D+ LR
Sbjct: 508 VNHVNNWVTRAYCDKVLR 525


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,420,840
Number of Sequences: 28952
Number of extensions: 273601
Number of successful extensions: 526
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)