Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G20
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 56 2e-08
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 56 2e-08
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 56 2e-08
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 56 2e-08
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 29 4.9
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 28 8.6
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 28 8.6
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 28 8.6
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 28 8.6
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 28 8.6
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 28 8.6
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 28 8.6
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLISEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQELFKRISEQFTAMFRRKAFLH YT G
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -1
Query: 686 HPARGMDEMEFTEAESNMNDLVSEYQQY 603
+ GMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYT 683
IQE KRIS+QF +FRRKAFLH YT
Sbjct: 372 IQEPLKRISKQFAGLFRRKAFLHWYT 397
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = -1
Query: 671 MDEMEFTEAESNMNDLVSEYQQY 603
M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 398 MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYT 683
IQE KRIS+QF +FRRKAFLH YT
Sbjct: 372 IQEPLKRISKQFAGLFRRKAFLHWYT 397
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = -1
Query: 671 MDEMEFTEAESNMNDLVSEYQQY 603
M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 398 MEESEFTDAENKVNDLISEFQQY 420
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
IQE + R+ +F M+ ++AF+H Y G
Sbjct: 384 IQEAWARLDHKFDLMYAKRAFVHWYVGEG 412
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 178 YLRCNFSSSFCNQCDELLAFSNE 110
YLRC++ +S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 717 CSGARLSCIXTPGEGHGRDGVHRG 646
C G +S I TPG+ H D H G
Sbjct: 1521 CGGGPISSISTPGDAHHHDDHHPG 1544
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 390 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 418
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E ++R+ +F M+ ++AF+H Y G
Sbjct: 379 IAEAWQRLDYKFDLMYAKRAFVHWYVGEG 407
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 389 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 417
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 383 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 411
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 362 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 390
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 760 IQELFKRISEQFTAMFRRKAFLHXYTRRG 674
I E + R+ +F M+ ++AF+H Y G
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,425,304
Number of Sequences: 27780
Number of extensions: 256779
Number of successful extensions: 598
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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