Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G18
(841 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 2e-62
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 2e-62
SB_56| Best HMM Match : Actin (HMM E-Value=0) 235 2e-62
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 235 3e-62
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 233 1e-61
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 233 1e-61
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 205 4e-53
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 75 5e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 4e-12
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_54| Best HMM Match : Actin (HMM E-Value=0) 55 8e-08
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.010
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.7
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 8.2
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 235 bits (576), Expect = 2e-62
Identities = 108/114 (94%), Positives = 112/114 (98%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHETTYNS+MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALA
Sbjct: 225 FQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALA 284
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 285 PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 703 YELPDGQVITIGNXKIPLP 647
YELPDGQVITIGN + P
Sbjct: 203 YELPDGQVITIGNERFRCP 221
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEA+F LG S
Sbjct: 192 TAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 234
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 235 bits (576), Expect = 2e-62
Identities = 108/114 (94%), Positives = 112/114 (98%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHETTYNS+MKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LA
Sbjct: 263 FQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 703 YELPDGQVITIGNXKIPLP 647
YELPDGQVITIGN + P
Sbjct: 241 YELPDGQVITIGNERFRCP 259
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEA+F LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 272
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 235 bits (576), Expect = 2e-62
Identities = 108/114 (94%), Positives = 112/114 (98%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHETTYNS+MKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LA
Sbjct: 262 FQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLA 321
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 703 YELPDGQVITIGNXKIPLP 647
YELPDGQVITIGN + P
Sbjct: 240 YELPDGQVITIGNERFRCP 258
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEA+F LG S
Sbjct: 229 TAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 271
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 235 bits (575), Expect = 3e-62
Identities = 108/114 (94%), Positives = 112/114 (98%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHETTYNS+MKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALA
Sbjct: 263 FQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALA 322
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 703 YELPDGQVITIGNXKIPLP 647
YELPDGQVITIGN + P
Sbjct: 241 YELPDGQVITIGNERFRCP 259
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS SLE P + RFRCPEA+F LG S
Sbjct: 230 TAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 272
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 233 bits (571), Expect = 1e-61
Identities = 107/114 (93%), Positives = 112/114 (98%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQPSFLGME+ GIHETTYNS+MKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALA
Sbjct: 262 FQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALA 321
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 703 YELPDGQVITIGNXKIPLP 647
YELPDGQVITIGN + P
Sbjct: 240 YELPDGQVITIGNERFRCP 258
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T A+S SLE P + RFRCPEA+F LG S
Sbjct: 229 TAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 271
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 233 bits (570), Expect = 1e-61
Identities = 106/113 (93%), Positives = 112/113 (99%)
Frame = -3
Query: 632 QPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 453
QPSFLGME+ GIHETTYNS+MKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAP
Sbjct: 237 QPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAP 296
Query: 452 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 297 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 703 YELPDGQVITIGNXKIPLP 647
YELPDGQVITIGN + P
Sbjct: 214 YELPDGQVITIGNERFRCP 232
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -2
Query: 735 TXASSXSLEXFTNFPTVRSSPSETXRFRCPEALFPTXVLGYGS 607
T ASS S+E P + RFRCPEAL LG S
Sbjct: 203 TAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMES 245
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 205 bits (500), Expect = 4e-53
Identities = 92/114 (80%), Positives = 103/114 (90%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 456
FQP+FLGMEA GIHE YN +MKCDVDIRKDLY+N VLSGG+TM+PGIADRMQKEI LA
Sbjct: 36 FQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLA 95
Query: 455 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 294
++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 96 NASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 703 YELPDGQVITIGNXKIPLP 647
YELPDGQVI+IGN + P
Sbjct: 14 YELPDGQVISIGNERFRCP 32
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 75.4 bits (177), Expect = 5e-14
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Frame = -3
Query: 641 LXFQPSFLGME-ACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 465
+ F P F + + E N + C +D+R+ LY N VLSGG+TM+ R+Q++I
Sbjct: 208 IFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIK 267
Query: 464 ----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 333
+ P ++ ++I+ ++Y+VW GGS+LAS F + +K +Y
Sbjct: 268 RTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADY 327
Query: 332 DESGPSIVHRKCF*THR 282
DE GPSI F HR
Sbjct: 328 DEHGPSICRHNPF-LHR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 69.3 bits (162), Expect = 4e-12
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -3
Query: 617 GMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 438
G A G+ + SV D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 437 KII---APPERKYSVWIGGSILASL 372
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 68.9 bits (161), Expect = 5e-12
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 29/139 (20%)
Frame = -3
Query: 650 AQRLXFQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 471
A FQP + +E G+ E +N++ D+D R + Y + VLSGG+TMYPG+ R+++E
Sbjct: 261 APEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320
Query: 470 ITAL---------------------APST-----MKIKI-IAPP-ERKYSVWIGGSILAS 375
I L P T K KI I P RK+ V++GG++LA
Sbjct: 321 IKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLAD 380
Query: 374 -LSTFQQMWISKQEYDESG 321
+ W++++EY+E G
Sbjct: 381 IMKDKDSFWMTRKEYEEKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 54.8 bits (126), Expect = 8e-08
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 635 FQPSFLGMEACGIHETTYNSVMKCDVDIRKDLYANTVLSG 516
FQPS LG + GIHE+ + S+ KCD+D+R +L+ N VLSG
Sbjct: 2307 FQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.0 bits (119), Expect = 6e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -3
Query: 581 NSVMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 426
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 425 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 327
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 37.9 bits (84), Expect = 0.010
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = -3
Query: 578 SVMKCDVDIRKDLYANTVLSGGTTMYPG 495
++ K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 385 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 558
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 559 TS 564
S
Sbjct: 815 AS 816
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 412 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 293
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -1
Query: 370 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 260
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 533 NTVLSGGTTMYPGIADRMQKEITALAP 453
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 367 PSNKCGSRNKSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 248
P N+ G++ + +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,795,961
Number of Sequences: 59808
Number of extensions: 479660
Number of successful extensions: 1346
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -