Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G16
(832 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 35 0.093
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.21
SB_39937| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 31 0.87
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 31 1.1
SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17) 31 1.1
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 30 2.0
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 30 2.0
SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 30 2.6
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 30 2.6
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 3.5
SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1) 29 3.5
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 3.5
SB_52684| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3) 29 4.6
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 29 4.6
SB_44456| Best HMM Match : PQQ (HMM E-Value=0.73) 29 4.6
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 6.1
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 29 6.1
SB_5429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_5103| Best HMM Match : Vicilin_N (HMM E-Value=0.36) 29 6.1
SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4) 28 8.1
SB_2184| Best HMM Match : AMP-binding (HMM E-Value=8.5e-06) 28 8.1
SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19) 28 8.1
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 34.7 bits (76), Expect = 0.093
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = -1
Query: 628 AQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 455
AQ PS SR+ S R + ++ SRS SR++ + RS+ +S S ++S SRS L
Sbjct: 36 AQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSRSRSL 93
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = -1
Query: 616 SMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
S SR+ S R + +R SRS+SR++ + RS+ S S G +QST S+
Sbjct: 54 SQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSRSRSLSGGSSQSTRNSS 105
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = -1
Query: 616 SMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 437
S SR S+ R + SRS SR++ + RS+ S S ++S SRS RS
Sbjct: 24 SRSRGSNGSRGKAQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSR 83
Query: 436 YRTQLRYR 413
R++ R R
Sbjct: 84 SRSRSRSR 91
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = -1
Query: 679 PXPGRKTSPYPVKYTLXAQCPSMSRASSVP--RQGTSARPLPPSRSTSRTQ*KRPCRSQL 506
P P R +P P PS A P R GT+ P PPSRS+ R P R
Sbjct: 289 PPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRP--PPPSRGAP 346
Query: 505 TSPSTG 488
PS G
Sbjct: 347 PPPSMG 352
>SB_39937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 481 GYGLSTGMLTGNGTAFSTGYGMCFSTGVRGGHWYLDGVRNW 603
G G+ GM G+GT TG+G TG G W G W
Sbjct: 154 GQGVGQGMGQGHGTGHGTGHGTGRWTGHGTGRWTGHGTGRW 194
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +1
Query: 454 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYGMCFSTGVRGG 573
TG WTG+G TG TG+GT TG+G GV G
Sbjct: 171 TGHGTGRWTGHG--TGRWTGHGTGRWTGHGTGMGQGVGQG 208
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1
Query: 454 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYGMCFSTGVRGG 573
TG WTG+G TG TG+GT G G GV G
Sbjct: 179 TGHGTGRWTGHG--TGRWTGHGTGMGQGVGQGMGQGVGQG 216
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +1
Query: 481 GYGLSTGMLTGNGTAFSTGYGMCFSTGVRGGHWYLDGVRNW 603
G G+ GM G G G+G TG G W G W
Sbjct: 146 GQGVGQGMGQGVGQGMGQGHGTGHGTGHGTGRWTGHGTGRW 186
>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -3
Query: 599 FRTPSRYQCPPLTPVEKHIPYPVEKA-VPFPVNIP-----VDRPYPVHIEKHVPVHIEK 441
F TP R + P P+ H P +EK +PFP +P PYPV + P I++
Sbjct: 448 FHTPPRVEHVPF-PIPVHSPPQIEKVPIPFPYPVPSPPQIKPMPYPVPVPVRQPPMIQR 505
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 31.5 bits (68), Expect = 0.87
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -1
Query: 616 SMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRS 440
S SR+ + R + R P+RS S + + RS S S HT+S SRS RS
Sbjct: 406 SSSRSRTKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSRSRS 464
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -1
Query: 580 TSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 413
+S+R SRS SR + + P RS+ S + ++S +RS RS R+++R R
Sbjct: 406 SSSRSRTKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSR 461
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 548 HIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVH 450
H P+PV V P +PV P PV + VP+H
Sbjct: 212 HHPFPVRVPVRVPFRVPVRVPVPVRVP--VPIH 242
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 518 PFPVNIPVDRPYPVHIEKHVPVHI 447
PFPV +PV P+ V + VPV +
Sbjct: 214 PFPVRVPVRVPFRVPVRVPVPVRV 237
>SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17)
Length = 505
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 673 PGRKTSPYPVK-YTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSP 497
P R P P K + +Q P+ R S+ R S P P S + +R++ P RS ++P
Sbjct: 281 PRRSNLPQPSKNHASRSQSPAPPRGRSLKR---SKSPAPGSAAAARSRSPSPARSSTSTP 337
Query: 496 ST 491
T
Sbjct: 338 PT 339
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 593 TPSRYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 453
TPS PL P +K I V VP PV +PV P+H + +P+
Sbjct: 1074 TPSN--ATPLAPAQKFIAIYVPVPVPVPVRVPV----PMHQQSPLPM 1114
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 590 PSRYQCPPLTPVEKHI--PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 456
P+ ++ PP P E+ + P+P E+ P P P P E+ P
Sbjct: 1448 PAEHRIPPPDPAERRVPPPFPAERRTPAPDPAERRVPPPFPAERRTP 1494
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 590 PSRYQCPPLTPVEKHI--PYPVEKAVPFPVNIPVDR 489
P Q PP P E+ + P+P E+ P PV P +R
Sbjct: 1548 PDECQMPPPDPAERRVSPPFPAERRTPTPV--PAER 1581
>SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1499
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 596 RTPSRYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 453
R P+ P PV P + A P PV +PV P P+++ +P+
Sbjct: 856 RVPAATPLPVRVPVATLPPVRLPVATPPPVRVPVATPLPLYVFLLLPL 903
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -3
Query: 572 PPLTPVEKHIP--YPVEKAVPFPVNIPVDRPYP--VHIEKHVPV 453
P +T + H+P +PV P ++P++RP P + H+P+
Sbjct: 533 PAVTHLPAHLPLEWPVPAVTRLPTHLPLERPVPAVTRLPTHLPL 576
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = -1
Query: 724 PXQIPNQXXPRREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSR 551
P P PR P P + +P P + MSR P+ G P PP R
Sbjct: 863 PVGAPPSLPPRPRTRPLPPKSDTPPPPPRPAADESQEMSRTRG-PKDGRKPPPPPPPR 919
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -1
Query: 694 RREAXPXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCR 515
R+ + P R+ SP+ + + S + S R+ + P+RS SR+Q P
Sbjct: 641 RKRSYSPPPRRRSPFRERRRSPPRRTSRWSSQSPDRRSPARIKSSPARSRSRSQSASPRH 700
Query: 514 SQLTSPSTGHTQ-STSRST 461
S+ SP+ Q T + T
Sbjct: 701 SKSKSPALSKVQVKTEKKT 719
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 679 PXPGRKTSPYPVK-YTLXAQCPSMSRASSVPRQGTSARPLPPSR 551
P PG P P++ T + P A P++G+S P PP+R
Sbjct: 243 PPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTR 286
>SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)
Length = 284
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 508 LTSPSTGHTQSTSRSTCLCTLRSPYRTQLRY 416
L P+T HT T+ T CT R PYR +RY
Sbjct: 112 LRIPNTLHTTHTAYRT-QCTYRIPYRYHIRY 141
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 679 PXPGRKTSPYPVK-YTLXAQCPSMSRASSVPRQGTSARPLPPSR 551
P PG P P++ T + P A P++G+S P PP+R
Sbjct: 155 PPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTR 198
>SB_52684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTL 446
R+G + RP P ++ +R ++P ++ P+ T+ TSR+ +L
Sbjct: 71 RRGRTIRPFPTNQQRTRQLRRQPSPIRIRIPAAQSTEETSRNLAQLSL 118
>SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3)
Length = 451
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTL 446
R+G + RP P ++ +R ++P ++ P+ T+ TSR+ +L
Sbjct: 317 RRGRTIRPFPTNQQRTRQLRRQPSPIRIRIPTAQSTEETSRNLAQLSL 364
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -1
Query: 619 PSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRS 440
PS +++S P QGT+ + P +T ++ HT S+ T+R
Sbjct: 814 PSQAQSSPSPAQGTAQPVVKTEEDVKPVITMAPASQAVTQSASPHTTSSPALPIAGTVRF 873
Query: 439 PYR 431
P+R
Sbjct: 874 PFR 876
>SB_44456| Best HMM Match : PQQ (HMM E-Value=0.73)
Length = 551
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTL 446
R+G + RP P ++ +R ++P ++ P+ T+ TSR+ +L
Sbjct: 381 RRGRTIRPFPTNQQRTRQLRRQPSPPRVRIPTAQSTEETSRNLAQLSL 428
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 605 SQFRTPSRYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVP 456
S TP PP P+ P P P P P P P+H H+P
Sbjct: 183 STIPTPPTPPAPPSPPIPTAPPTPPMPETPLPPGSPHIPPAPLH--PHIP 230
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -1
Query: 592 PRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
PRQ P P SR ++TQ + RS + ST HT S++ S
Sbjct: 255 PRQEHPPPPPPGSRGRAKTQLQLIPRSLQKTSSTPHTSSSTSS 297
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/68 (32%), Positives = 24/68 (35%)
Frame = -1
Query: 664 KTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGH 485
KT P P + PRQ T R R SR RP + TS T H
Sbjct: 119 KTKPQDKNKPQDQDKPQDQDQGARPRQATRPRQAARPRQASRP---RPRGNTKTSRKTSH 175
Query: 484 TQSTSRST 461
TSR T
Sbjct: 176 KTETSRKT 183
>SB_5429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTL 446
R+G + RP P ++ +R ++P ++ P+ T+ TSR+ +L
Sbjct: 89 RRGRTIRPFPTNQQRTRQLRRQPSPIRVRIPTAQSTEETSRNLAQLSL 136
>SB_5103| Best HMM Match : Vicilin_N (HMM E-Value=0.36)
Length = 592
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -1
Query: 589 RQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTL 446
R+G + RP P ++ +R ++P ++ P+ T+ TSR+ +L
Sbjct: 421 RRGRTIRPFPTNQQRTRQLRRQPSPIRVRIPTAQSTEETSRNLAQLSL 468
>SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -1
Query: 679 PXPGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSA-RPLPPSRSTSRTQ*KRPCRSQLT 503
P R +S P+ A+ PS+ ++ P TSA RPLP ST + RS
Sbjct: 491 PSSVRTSSERPLPVRTSAERPSLRTSAERPSLRTSAERPLPVRTSTDTSS---SFRSSTE 547
Query: 502 SPSTGHTQSTSRST 461
P + H + R +
Sbjct: 548 RPFSFHADTERRES 561
>SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4)
Length = 179
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -3
Query: 590 PSRYQCPPLTPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 447
P + P P++ H+P P V++P P VH+ P+ +
Sbjct: 43 PIKVHLPNKHPIKVHLPNKHPIKHPIKVHLPNKHPIKVHLPNKHPIKV 90
>SB_2184| Best HMM Match : AMP-binding (HMM E-Value=8.5e-06)
Length = 757
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = -1
Query: 673 PGRKTSPYPVKYTLXAQCPSMSRASSVPRQGTSARPLPPSRSTSRTQ*KRPCRSQLTSPS 494
P K V T A+ P R S+ QGTS P+ S + S CRS S S
Sbjct: 347 PATKAPEVAVAVTATAR-PKSERTKSISHQGTSEHPIMASLALSSRASHLLCRSIRLSSS 405
>SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19)
Length = 544
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 742 SMGQXYPXQIPNQXXPRREAXPXPGRKTSPYP 647
S G YP + P R P PGR+ +PYP
Sbjct: 186 SRGAPYPGR-RGAPYPGRRGAPYPGRRGAPYP 216
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,459,415
Number of Sequences: 59808
Number of extensions: 294976
Number of successful extensions: 1241
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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