Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_G13
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    38   3e-04
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    37   8e-04
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   4.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   6.2  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = -3

Query: 644 CDMNFKNEMSYYQHMKYNLKHVDPAKLKYACELCDKKFVKAARLEEHNMAVHPE 483
           CDM+++ ++ Y +H +Y +  +        C +C K F +    + H  A+HP+
Sbjct: 354 CDMSYRTKLQYQKH-EYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPK 406



 Score = 23.8 bits (49), Expect = 6.2
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 563 KYACELCDKKFVKAARLEEHNMAVH 489
           ++ C LCD  +    + ++H   VH
Sbjct: 348 RFQCNLCDMSYRTKLQYQKHEYEVH 372


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 36.7 bits (81), Expect = 8e-04
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 370 HVFHACGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
           H    C + + T  +L+ HV +HTG +P  C  C + F
Sbjct: 155 HKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCF 192



 Score = 36.3 bits (80), Expect = 0.001
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 370 HVFHACGKAYTTKKTLEGHVRSHTGERPFACTRC 269
           H    C  A      L+ H+R+HTGE+PF C  C
Sbjct: 212 HKCTECDYASVELSKLKRHIRTHTGEKPFQCPHC 245



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTRCPSTFR 254
           C  A  + + LE H+  HT ++P+ C +C  TFR
Sbjct: 360 CPYASISMRHLESHLLLHTDQKPYKCDQCAQTFR 393



 Score = 33.1 bits (72), Expect = 0.010
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTRCPSTF 257
           C  A   K  L  H+R HTGE+P++C  C + F
Sbjct: 245 CTYASPDKFKLTRHMRIHTGEKPYSCDVCFARF 277



 Score = 32.3 bits (70), Expect = 0.018
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -1

Query: 355 CGKAYTTKKTLEGHVR-SHTGERPFACTRC 269
           C   +TT   L  H+R  HT ERP  CT C
Sbjct: 188 CDNCFTTSGELIRHIRYRHTHERPHKCTEC 217



 Score = 30.7 bits (66), Expect = 0.054
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -1

Query: 355 CGKAYTTKKTLEGHVRS-HTGERPFACTRCPSTF 257
           C      K  L  HV++ HT ++P  C RC STF
Sbjct: 303 CPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTF 336



 Score = 27.9 bits (59), Expect = 0.38
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 355 CGKAYTTKKTLEGHVRSHTGERPFACTRCP 266
           C   +  + + + H ++H GE+ + C  CP
Sbjct: 332 CDSTFPDRYSYKMHAKTHEGEKCYRCEYCP 361



 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/50 (22%), Positives = 24/50 (48%)
 Frame = -3

Query: 647 HCDMNFKNEMSYYQHMKYNLKHVDPAKLKYACELCDKKFVKAARLEEHNM 498
           HC     ++    +HM+     +   +  Y+C++C  +F ++  L+ H M
Sbjct: 244 HCTYASPDKFKLTRHMR-----IHTGEKPYSCDVCFARFTQSNSLKAHKM 288


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 560  YACELCDKKFVKAARLEEHNMAVHPE 483
            + C +C +KF +   ++ H    HPE
Sbjct: 923  HECPVCGQKFTRRDNMKAHCKVKHPE 948


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 644 CDMNFKNEMSYYQHMKYNLKHVDP--AKLKYACELCDKKFVKAARLEEHNMA 495
           CD   +     +Q    N+    P  A+L+  CE+   + ++ A LEE ++A
Sbjct: 325 CDETMQRVTRLHQDPHRNIFWWSPLLARLRNNCEVARDRMLQTADLEERSIA 376


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 175 IPTVLTPELMSRQRSIST 122
           I T L PE+MS +RSI T
Sbjct: 390 IDTELKPEMMSIERSIET 407


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,679
Number of Sequences: 2352
Number of extensions: 8527
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)