Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_G12
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   7.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.2  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 269 VRRLDVCNVGSVEL*PPSPS*CELVL 192
           + +LDVC  G V L   +P   ELVL
Sbjct: 69  IYKLDVCGTGGVNL--LNPEDVELVL 92


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = +3

Query: 435 TTVGPIYRKICEG--AAGGDARQSRGVVDG 518
           TT G +  K      A   D R+SRG VDG
Sbjct: 312 TTKGKVRAKTQNATPANNNDKRKSRGEVDG 341


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 10  FFFHNSLYCFN 42
           FF   SLYCFN
Sbjct: 69  FFKEASLYCFN 79


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = +3

Query: 435 TTVGPIYRKICEG--AAGGDARQSRGVVDG 518
           TT G +  K      A   D R+SRG VDG
Sbjct: 312 TTKGKVRAKTQNATPANNNDKRKSRGEVDG 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,976
Number of Sequences: 336
Number of extensions: 2148
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)