Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_G02
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 33 0.20
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 31 0.79
SB_44236| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_38412| Best HMM Match : DUF733 (HMM E-Value=8.1) 30 1.8
SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 30 1.8
SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_43872| Best HMM Match : DUF229 (HMM E-Value=0) 29 5.6
SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 29 5.6
SB_23619| Best HMM Match : TPR_1 (HMM E-Value=5.6) 29 5.6
SB_18223| Best HMM Match : TPR_1 (HMM E-Value=0.11) 29 5.6
SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082) 29 5.6
SB_27117| Best HMM Match : SAM_1 (HMM E-Value=6.3e-07) 29 5.6
SB_23059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_58596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12) 28 9.8
SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32) 28 9.8
SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) 28 9.8
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_38303| Best HMM Match : Fz (HMM E-Value=9.8e-07) 28 9.8
SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13) 28 9.8
SB_19978| Best HMM Match : DUF229 (HMM E-Value=0.00021) 28 9.8
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324
H K G + + + NKAL ID N++ L RG N ++K+ EDF
Sbjct: 1028 HLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDYEKSKEDF 1075
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
H K G EA + N ALSID +V+ L R Y + +A+ DF+
Sbjct: 130 HLKLGFSQEAIKECNAALSIDENDVDALCDRAEAYILEEMYNEAVNDFQ 178
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -1
Query: 536 YADELRQAQASKWAFRS-VAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYA 360
Y D+ Q + K +F + +AEG FK + +A + AL + P + LVAR Y
Sbjct: 2 YEDDEEQEEGPKSSFSTYLAEGDVLFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYL 61
Query: 359 NSGTFKKAIEDFE 321
G A D E
Sbjct: 62 KLGKNDAAYRDAE 74
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 31.5 bits (68), Expect = 0.79
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Frame = -2
Query: 364 TPIVEHS-KRP*KILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQ----KAY 200
TP +E S K K+ + L N +++K T +L + E+E E Q K Y
Sbjct: 8 TPAIEESRKNTHKLSKKLLSANSTTTHSKKISKAT--SLKKKQEEERAAKERQEKLLKLY 65
Query: 199 EDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLK--QLLN 26
E + HEE ++ +LK K T LI+ + L + ++ ++ ++ +K QLL
Sbjct: 66 ELWHQVK--HEEREDRHGYLKDKVTLQHALIQQQDELCK-VKQSRLHKQQQQIKKTQLLA 122
Query: 25 LTEKKKK 5
E+ K+
Sbjct: 123 RQERNKR 129
>SB_44236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 354 TIGVQCSSSNKTLYISRIYAQSFIQALKCFRMSSSFKMFNAFC 482
T G+Q S KT++ + + F+ A C ++ F +N +C
Sbjct: 103 TAGLQAKSFFKTVFNQHLKSNVFVTAFDCSNVAKLFVDYNVYC 145
>SB_38412| Best HMM Match : DUF733 (HMM E-Value=8.1)
Length = 280
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 488 SVAEGIEHFKAGRHSEAFQCLNKALSI 408
+++ G EH GRH E F LNKAL +
Sbjct: 247 TISTGAEHPSHGRHQEFFNELNKALDL 273
>SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 503
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 455 GRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
G + +A C N+AL +P + L R A+ G KKA+E ++
Sbjct: 54 GNYKQALACYNQALKHNPDDPTILWERAAVCYQMGDVKKALEYYQ 98
>SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -1
Query: 626 CIQFLSEHLGIANMHCTNFSYLRGRFASSEYADELRQAQASK--WAFRSVAEGIEHFKAG 453
C Q S L + + N Y + Y E R + K W+F++ + EH KA
Sbjct: 98 CSQMFSNPLALQDTRFLNLMY------TMHYNGEKRPFKCDKCWWSFKNPSGLREHIKAV 151
Query: 452 RHSEAFQC 429
+SE F+C
Sbjct: 152 HNSEKFKC 159
>SB_43872| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 806
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 354 TIGVQCSSSNKTLYISRIYAQSFIQALK 437
+ GV S K+LYI R Y +I ALK
Sbjct: 46 SFGVPSESKEKSLYIKRSYIDLYINALK 73
>SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGAL 366
+G+E +AG A C NKA+ + P G R L
Sbjct: 52 QGVEKAEAGDFVGALDCFNKAIDVAPLRASGYNNRAQL 89
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 166 EAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLT 20
E Q L L S P++ ++ PGL G K Y+ + L + NLT
Sbjct: 989 ERQADLIALLETKNNSIPVVSDLDIQAPGLLGQKQYQEQLNLLEQRNLT 1037
>SB_23619| Best HMM Match : TPR_1 (HMM E-Value=5.6)
Length = 71
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 229 NQITEAQKAYEDCLAIIPFHEEAQN 155
N++ EA AY+D L I PF EA N
Sbjct: 3 NKLEEAVAAYDDALKIDPFFVEAYN 27
>SB_18223| Best HMM Match : TPR_1 (HMM E-Value=0.11)
Length = 96
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGAL 366
+G+E +AG A C NKA+ + P G R L
Sbjct: 52 QGVEKAEAGDFVGALDCFNKAIDVAPLRASGYNNRAQL 89
>SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082)
Length = 363
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 166 EAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLT 20
E Q L L S P++ ++ PGL G K Y+ + L + NLT
Sbjct: 269 ERQADLIALLETKNNSIPVVSDLDIQAPGLLGQKQYQEQLNLLEQRNLT 317
>SB_27117| Best HMM Match : SAM_1 (HMM E-Value=6.3e-07)
Length = 367
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 515 AQASKWAFRSVAEGIEHFKAGRHSEAFQ 432
+Q +W VA + H K G+++EAF+
Sbjct: 296 SQMEEWTVNDVANHLVHIKLGKYAEAFK 323
>SB_23059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 422 KALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324
+AL IDP +VE + G+++ +G +KA+ F
Sbjct: 85 RALEIDPDHVEAIEMAGSVFLETGQPEKAVNCF 117
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -1
Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
+ K + A NKA+ +D + ++G R G FK +++D+E
Sbjct: 231 YLKTEYYGLALADANKAIQLDRKYIKGYYRRATANMALGKFKLSLKDYE 279
>SB_58596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -1
Query: 563 LRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHS 444
+ GR S + +A+ W F + E I H+++G+H+
Sbjct: 92 IMGRSRPSIKLTDFLRAEIEYWRFIDIGESILHWRSGKHA 131
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -1
Query: 440 AFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFET 318
A QC ++A+ I+P + +++ +SG +AI+ + T
Sbjct: 417 AIQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRT 457
>SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12)
Length = 379
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Frame = -1
Query: 683 KEKTMKPYWRRAQAFNNPNCIQFLSEHLGIANM--HCTNFSYLRGRFASSEYADELRQAQ 510
K K K R N P C+ +SEH + + T+ S R F DE + +
Sbjct: 169 KHKDEKLLLRYCANCNEPLCLSCISEHANLQHKVEELTDSSLARCLFKVGNIIDEFLEMR 228
Query: 509 ASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVAR 375
EG+E K ++A C + + +E ++ R
Sbjct: 229 K---VLHDSMEGVEAEKRELENQAQNCKQEIEEATNKIIEAVLVR 270
>SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32)
Length = 898
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 277 YLGETLVALGRSYEDENQITEAQKAYEDCLAI 182
Y+G+TL L + +I+EAQKA E+C I
Sbjct: 353 YVGKTLHGLPATPNRLTEISEAQKADEECSPI 384
>SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)
Length = 605
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Frame = -1
Query: 683 KEKTMKPYWRRAQAFNNPNCIQFLSEHLGIANM--HCTNFSYLRGRFASSEYADELRQAQ 510
K K K R N P C+ +SEH + + T+ S R F DE + +
Sbjct: 169 KHKDEKLLLRYCANCNEPLCLSCISEHANLQHKVEELTDSSLARCLFKVGNIIDEFLEMR 228
Query: 509 ASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVAR 375
EG+E K ++A C + + +E ++ R
Sbjct: 229 K---VLHDSMEGVEAEKRELENQAQNCKQEIEEATNKIIEAVLVR 270
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 283 RKYLGETLVALGRSYEDENQITEAQKAYEDCLAI 182
+ Y+G+TL L + +I EAQKA E+C I
Sbjct: 2352 KSYVGKTLHGLPTTPNRLTEIREAQKADEECSLI 2385
>SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 882
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 361 AYNAP-LATRPST-FLGSMLRALFKH*NASECLPALKCSMPSATERNAHLL 507
A N P +A+R T +L L L H + CLP LK + S T + HLL
Sbjct: 321 ARNYPTVASRNGTPYLAKTLNKLLMH-HIRNCLPELKSRVNSMTSQYHHLL 370
>SB_38303| Best HMM Match : Fz (HMM E-Value=9.8e-07)
Length = 528
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 376 EEHCTPIVEHSKRP*KILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQKAYE 197
EE C PI +HSK I + N K E+ ++ R +D N+ +K +E
Sbjct: 108 EEACKPIEKHSKYDMSIFK-------RSTNGLKNADESQSSVNRLNDDSNKTLIREKRHE 160
Query: 196 DC 191
C
Sbjct: 161 SC 162
>SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13)
Length = 452
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 455 GRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
G S A++ AL ++PR+ E RG L +G A+ DF+
Sbjct: 212 GDASAAYEHFTAALLLEPRSAETFHLRGMLQYMNGKPALALNDFK 256
>SB_19978| Best HMM Match : DUF229 (HMM E-Value=0.00021)
Length = 552
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 307 LNPNHANARKYLGETLVALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSK 131
LNP+ N R G + LG+S+ + Q +AQK + L H A S+ ++ +
Sbjct: 324 LNPSTWNRRSVPGNCVRLLGKSFSNIRQRRDAQK---NLLTTFDLHVTAHTSVPLIEDE 379
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,525,358
Number of Sequences: 59808
Number of extensions: 421587
Number of successful extensions: 994
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -