Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F23
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.75 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.75 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.2  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -2

Query: 185 VKICILIGSTTSYSLFWLNHYFRYIYTYLY*EILSTDMKSLIIFLIFLTI 36
           V +  +I + T+YS++  + Y+R +YT  +  +L    + LI+ L F  I
Sbjct: 48  VVLVSIIAAGTAYSIYVRHTYYRRLYTITH-LVLDYLDEFLIVALAFQVI 96


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -2

Query: 185 VKICILIGSTTSYSLFWLNHYFRYIYTYLY*EILSTDMKSLIIFLIFLTI 36
           V +  +I + T+YS++  + Y+R +YT  +  +L    + LI+ L F  I
Sbjct: 48  VVLVSIIAAGTAYSIYVRHTYYRRLYTITH-LVLDYLDEFLIVALAFQVI 96


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 130 FNQNKE*DVVDPISIHIFTITNATYRLNELM 222
           F+ NK+ D +  IS +++ +    Y+L  +M
Sbjct: 214 FSDNKQDDKIPQISDNLYILCRLHYKLTSVM 244


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 130 FNQNKE*DVVDPISIHIFTITNATYRLNELM 222
           F+ NK+ D +  IS +++ +    Y+L  +M
Sbjct: 214 FSDNKQDDKIPQISDNLYILCRLHYKLTSVM 244


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 651 KRPKWRCSXXXSRPCASVTPNXGEKCSDXP 562
           KR  W+       P +SV+P   +   D P
Sbjct: 105 KRKTWKVEEDSPSPTSSVSPEVKDSSRDRP 134


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 283 GILITPCKVAPFFIIHSFINSLI 215
           GIL+    + P F  HSF+ S++
Sbjct: 87  GILLNQL-ITPLFFFHSFMTSVL 108


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 15/61 (24%), Positives = 27/61 (44%)
 Frame = -2

Query: 194 FVIVKICILIGSTTSYSLFWLNHYFRYIYTYLY*EILSTDMKSLIIFLIFLTINGMRWRK 15
           FV+ ++  L  ST    +F       +  T+L   ++    + L+I LI + I   + R 
Sbjct: 141 FVLKQVMFLCYSTYGIQVFGTMQRTSFFKTFLNSCLMDVYYEFLLISLINILIRSFKSRY 200

Query: 14  K 12
           K
Sbjct: 201 K 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,245
Number of Sequences: 336
Number of extensions: 3041
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)