Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F23
         (843 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g23980.1 68418.m02818 ferric-chelate reductase, putative simi...    30   1.7  
At1g08320.1 68414.m00920 bZIP family transcription factor contai...    30   2.2  
At5g23990.1 68418.m02819 ferric-chelate reductase, putative simi...    29   5.1  
At5g02930.1 68418.m00236 F-box family protein low similarity to ...    29   5.1  

>At5g23980.1 68418.m02818 ferric-chelate reductase, putative similar
           to ferric-chelate reductase (FRO1) [Pisum sativum]
           GI:15341529; contains Pfam profile PF01794: Ferric
           reductase like transmembrane component
          Length = 699

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -2

Query: 185 VKICILIGSTTSYSLFWLNHYFRYIYTYLY*EILSTDMKSLIIFLIFLTINGMRWRKKKK 6
           V   +LIG  T Y ++ ++H    IY + Y  +    + S  IF+    +    WRKK+ 
Sbjct: 538 VMFLLLIGIVTRYYIYPVDHNTGSIYNFSYRGLWDMFLGSACIFISSSVV--FLWRKKQN 595

Query: 5   K 3
           K
Sbjct: 596 K 596


>At1g08320.1 68414.m00920 bZIP family transcription factor contains
           Pfam profile: PF00170 bZIP transcription factor
          Length = 481

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -3

Query: 763 RPTGXXRTVTXKTRSVDXRRSRKKEQNKNAATRYRQKKKAXXXXXXXXEQTLRQRHTELR 584
           +P+   R  T   + +D +  R+  QN+ AA + R +KKA           L Q   EL+
Sbjct: 160 KPSEDKRKATTSGKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQELQ 219


>At5g23990.1 68418.m02819 ferric-chelate reductase, putative similar
           to ferric-chelate reductase (FRO1) [Pisum sativum]
           GI:15341529; contains Pfam profile PF01794: Ferric
           reductase like transmembrane component
          Length = 657

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -2

Query: 185 VKICILIGSTTSYSLFWLNHYFRYIYTYLY*EILSTDMKSLIIFLIFLTINGMRWRKKKK 6
           V   +LIG  T Y ++ ++H    IY + Y  +    +  + IF+    I    WRKK+ 
Sbjct: 496 VMFLLLIGIVTRYYIYPVDHNTGSIYNFTYRVLWVMFLGCVCIFISSSII--FLWRKKEN 553

Query: 5   K 3
           K
Sbjct: 554 K 554


>At5g02930.1 68418.m00236 F-box family protein low similarity to
           ribosomal RNA apurinic site specific lyase [Triticum
           aestivum] GI:6505722; contains F-box domain Pfam:PF00646
          Length = 469

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = -3

Query: 460 QYAKTHKAID-SVDHRKLREFFNLDDFYFTIK*FNSVIVCI*VSRSDVTLSSSISYVIIR 284
           ++A +H   D S+  R+   F+N DD ++T    NS +  + +   D+     +S+  ++
Sbjct: 117 EFAMSHNVDDLSLAFRRCSPFYNFDDCFYT----NSSLKRVELRYVDLMPRCMVSWTSLK 172

Query: 283 GILITPCKVA 254
            + +T C ++
Sbjct: 173 NLSLTDCTMS 182


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,931,731
Number of Sequences: 28952
Number of extensions: 247583
Number of successful extensions: 452
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)