BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_F21 (824 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 65 8e-11 SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 65 8e-11 SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 65 8e-11 SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 59 5e-09 SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 59 5e-09 SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 30 0.002 SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 36 0.030 SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 6.1 SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 29 6.1 SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 29 6.1 SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 29 6.1 SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 29 6.1 SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 6.1 SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 6.1 SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 29 6.1 SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 29 6.1 SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07) 28 8.0 >SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) Length = 446 Score = 64.9 bits (151), Expect = 8e-11 Identities = 39/69 (56%), Positives = 39/69 (56%) Frame = -2 Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629 P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM Sbjct: 357 PPRGLKMSATFIGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415 Query: 628 NDLVSEYQQ 602 NDLVSEYQQ Sbjct: 416 NDLVSEYQQ 424 >SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) Length = 391 Score = 64.9 bits (151), Expect = 8e-11 Identities = 39/69 (56%), Positives = 39/69 (56%) Frame = -2 Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629 P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM Sbjct: 302 PPRGLKMSATFIGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 360 Query: 628 NDLVSEYQQ 602 NDLVSEYQQ Sbjct: 361 NDLVSEYQQ 369 >SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) Length = 446 Score = 64.9 bits (151), Expect = 8e-11 Identities = 39/69 (56%), Positives = 39/69 (56%) Frame = -2 Query: 808 PXXGXKMXATFXR*LXPPXRSCSXASRXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNM 629 P G KM ATF S Q AMFRR GEGMDEMEFTEAESNM Sbjct: 357 PPRGLKMSATFIGNSTAIQELFKRISE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415 Query: 628 NDLVSEYQQ 602 NDLVSEYQQ Sbjct: 416 NDLVSEYQQ 424 >SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) Length = 747 Score = 58.8 bits (136), Expect = 5e-09 Identities = 28/41 (68%), Positives = 31/41 (75%) Frame = -2 Query: 724 QLPAMFRRXLSCIGTPGEGMDEMEFTEAESNMNDLVSEYQQ 602 Q AMFRR GEGMDEMEFTEAESNM+DL++EYQQ Sbjct: 149 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 189 Score = 32.3 bits (70), Expect = 0.49 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 752 QELFXRISXXVTRYVQAXAFLHWYT 678 QELF R+ T + AFLHWYT Sbjct: 140 QELFKRVGEQFTAMFRRKAFLHWYT 164 >SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) Length = 271 Score = 58.8 bits (136), Expect = 5e-09 Identities = 28/41 (68%), Positives = 31/41 (75%) Frame = -2 Query: 724 QLPAMFRRXLSCIGTPGEGMDEMEFTEAESNMNDLVSEYQQ 602 Q AMFRR GEGMDEMEFTEAESNM+DL++EYQQ Sbjct: 211 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 251 Score = 32.3 bits (70), Expect = 0.49 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 752 QELFXRISXXVTRYVQAXAFLHWYT 678 QELF R+ T + AFLHWYT Sbjct: 202 QELFKRVGEQFTAMFRRKAFLHWYT 226 >SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) Length = 629 Score = 29.9 bits (64), Expect(2) = 0.002 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = -2 Query: 652 FTEAESNMNDLVSEYQQ 602 + A+SN+NDL+SEYQQ Sbjct: 256 YFSADSNLNDLISEYQQ 272 Score = 29.5 bits (63), Expect(2) = 0.002 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = -2 Query: 724 QLPAMFRRXLSCIGTPGEGMDEMEFTEAESN 632 Q AMFRR EGMD +EFTE + N Sbjct: 203 QFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233 >SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) Length = 375 Score = 36.3 bits (80), Expect = 0.030 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = -2 Query: 730 RXQLPAMFRRXLSCIGTPGEGMDEMEFTEAESNMNDLVSEYQQ 602 R MFRR EGMD +F EA++++ DL+S YQQ Sbjct: 287 RLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329 Score = 29.5 bits (63), Expect = 3.5 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -1 Query: 752 QELFXRISXXVTRYVQAXAFLHWYT 678 QELF RI + AFLHWYT Sbjct: 280 QELFKRIRLHYKLMFRRRAFLHWYT 304 >SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 65 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 24 GEGMEEGEFSEAREDLAALEKDYEE 48 >SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) Length = 232 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 208 GEGMEEGEFSEAREDLAALEKDYEE 232 >SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) Length = 536 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 394 GEGMEEGEFSEAREDLAALEKDYEE 418 >SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) Length = 149 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 108 GEGMEEGEFSEAREDLAALEKDYEE 132 >SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 602 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 562 GEGMEEGEFSEAREDLAALEKDYEE 586 >SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 389 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 347 GEGMEEGEFSEAREDLAALEKDYEE 371 >SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1231 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 781 GEGMEEGEFSEAREDLAALEKDYEE 805 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 1190 GEGMEEGEFSEAREDLAALEKDYEE 1214 >SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 452 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434 >SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 865 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 395 GEGMEEGEFSEAREDLAALEKDYEE 419 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 826 GEGMEEGEFSEAREDLAALEKDYEE 850 >SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 417 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 375 GEGMEEGEFSEAREDLAALEKDYEE 399 >SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) Length = 885 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 843 GEGMEEGEFSEAREDLAALEKDYEE 867 >SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) Length = 1036 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 995 GEGMEEGEFSEAREDLAALEKDYEE 1019 >SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) Length = 377 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 335 GEGMEEGEFSEAREDLAALEKDYEE 359 >SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) Length = 250 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 208 GEGMEEGEFSEAREDLAALEKDYEE 232 >SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) Length = 365 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 323 GEGMEEGEFSEAREDLAALEKDYEE 347 >SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) Length = 451 Score = 28.7 bits (61), Expect = 6.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -2 Query: 676 GEGMDEMEFTEAESNMNDLVSEYQQ 602 GEGM+E EF+EA ++ L +Y++ Sbjct: 410 GEGMEEGEFSEAREDLAALEKDYEE 434 >SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07) Length = 502 Score = 28.3 bits (60), Expect = 8.0 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +1 Query: 178 NQVQPYKKKDLFPLCDSVTAPRACSAEGLASLRVAVYCNKHSRAALR 318 +++Q L LC SV+ C+ A L ++C + S A LR Sbjct: 136 SRLQQLASLSLTDLCQSVSGDEGCAVAETAELIALMHCLESSAATLR 182 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,909,573 Number of Sequences: 59808 Number of extensions: 367490 Number of successful extensions: 931 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 863 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 928 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2311562737 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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