Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F20
         (803 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g47470.2 68415.m05924 thioredoxin family protein similar to p...    29   2.7  
At2g47470.1 68415.m05925 thioredoxin family protein similar to p...    29   2.7  
At2g21680.1 68415.m02579 kelch repeat-containing F-box family pr...    29   4.8  
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049...    28   8.3  
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s...    28   8.3  
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s...    28   8.3  
At1g13150.1 68414.m01525 cytochrome P450, putative strong simila...    28   8.3  

>At2g47470.2 68415.m05924 thioredoxin family protein similar to
           protein disulfide isomerase [Dictyostelium discoideum]
           GI:2627440; contains Pfam profile: PF00085 Thioredoxin
          Length = 266

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQATSELK 609
           +PTI    +   EPQ+Y G R  E   +YV+++  + +K
Sbjct: 97  YPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTNVK 135



 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQA 624
           FPT+    +  +    Y+GGR  +DF+ +++E++
Sbjct: 216 FPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKS 249


>At2g47470.1 68415.m05925 thioredoxin family protein similar to
           protein disulfide isomerase [Dictyostelium discoideum]
           GI:2627440; contains Pfam profile: PF00085 Thioredoxin
          Length = 361

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQATSELK 609
           +PTI    +   EPQ+Y G R  E   +YV+++  + +K
Sbjct: 97  YPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTNVK 135



 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQA 624
           FPT+    +  +    Y+GGR  +DF+ +++E++
Sbjct: 216 FPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKS 249


>At2g21680.1 68415.m02579 kelch repeat-containing F-box family
           protein low similarity to SKP1 interacting partner 6
           [Arabidopsis thaliana] GI:10716957; contains Pfam
           profiles PF01344: Kelch motif, PF00646: F-box domain
          Length = 414

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 189 DFYKNVYYFLTKRSKMLSYICAPYTESNER*NCVYASVLFCKSSKV 326
           D  +N++ +  K SK  S+   P + S    +CV  ++LFC ++ V
Sbjct: 262 DLTRNIHIYDPKESKWESWTHGPLSASWNDSSCVVDNLLFCINTSV 307


>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
           At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
           At5g34895, At2g02200
          Length = 671

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -1

Query: 692 QEPQRYNGGRAXEDFIKYVSEQATSELKGWDRXGNAKQGKEEL 564
           +E Q   G    E+ ++Y    +T  ++  ++  N KQG EE+
Sbjct: 386 EEKQEEEGKEEEEEKVEYRDHHSTCNVEETEKQENPKQGDEEM 428


>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
           similar to SP|P29828 Protein disulfide isomerase
           precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
           contains non-consensus GA donor splice site at intron 9
          Length = 487

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQ---ATSELKGWD 600
           FPTI       +  Q YNG R  E  + Y+ +Q   A++E+K  D
Sbjct: 107 FPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQSGPASAEIKSAD 151


>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
           similar to SP|P29828 Protein disulfide isomerase
           precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
           contains non-consensus GA donor splice site at intron 9
          Length = 501

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -1

Query: 725 FPTIXXSLRQLQEPQRYNGGRAXEDFIKYVSEQ---ATSELKGWD 600
           FPTI       +  Q YNG R  E  + Y+ +Q   A++E+K  D
Sbjct: 107 FPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQSGPASAEIKSAD 151


>At1g13150.1 68414.m01525 cytochrome P450, putative strong
           similarity to gi|3313615 F21J9.9 from Arabidopsis
           thaliana and is a member of the PF|00067 Cytochrome P450
           family
          Length = 529

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 306 ITQMHKHSFISHCFQCTGH 250
           IT+MH   F+ H FQ T H
Sbjct: 139 ITEMHSTGFVEHSFQTTQH 157


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,403,785
Number of Sequences: 28952
Number of extensions: 312509
Number of successful extensions: 810
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)