Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F18
(855 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46966| Best HMM Match : NUDE_C (HMM E-Value=1.5) 65 8e-11
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 35 0.073
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 32 0.52
SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_55696| Best HMM Match : SNF7 (HMM E-Value=0) 29 4.8
SB_55695| Best HMM Match : SNF7 (HMM E-Value=0) 29 4.8
SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071) 28 8.4
SB_58| Best HMM Match : Prenyltrans (HMM E-Value=1.4e-16) 28 8.4
>SB_46966| Best HMM Match : NUDE_C (HMM E-Value=1.5)
Length = 278
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = -1
Query: 420 KALETALKEAKDGAMRDRKRYQFEVDRIKEAVRAKNLA-RRGPQAQIAKPIR 268
K+LE ALKEAK GA RDR RYQ EV+RI+E++R K A ++ QA IAKPIR
Sbjct: 27 KSLEHALKEAKQGAQRDRSRYQKEVERIRESMRQKQAASKKSAQAHIAKPIR 78
Score = 59.7 bits (138), Expect = 3e-09
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Frame = -3
Query: 499 LVRDNADLRCEVPKLEKRLRATMERVQ----GTRDSAQGSKR-RCNARSQTIPVRSGQNQ 335
LVRDNADLRCE+PKLEKRLRAT ERV+ +++ QG++R R + + +R Q
Sbjct: 1 LVRDNADLRCELPKLEKRLRATQERVKSLEHALKEAKQGAQRDRSRYQKEVERIRESMRQ 60
Query: 334 GSRAR*KSCSPRSTGPNR 281
A KS P R
Sbjct: 61 KQAASKKSAQAHIAKPIR 78
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 35.1 bits (77), Expect = 0.073
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = -3
Query: 559 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVQGTRDSAQGSKR 386
KQ++ +N E+L +++L ++N DLR +V L KR+R ++ +D A+ K+
Sbjct: 1218 KQELQSYKNRYEKLESDYRKLQQENVDLRAKVNALNKRIR----DLEAAKDRAEKEKQ 1271
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 32.3 bits (70), Expect = 0.52
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 474 DAKCPSWRNDSEPPWNVXKALETALKEAKDGAMRDRKR 361
D++C SW DS+PP + A+ A+ G+ + +++
Sbjct: 485 DSRCVSWTQDSKPPSSACSAVSHQTVRAQSGSQKSQRK 522
>SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 31.5 bits (68), Expect = 0.90
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = -3
Query: 556 QKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVQGTRDSAQGSKRRCN 377
Q ++ +EN LE+L + + + + ++ + + E+RLR E+++ R + RR
Sbjct: 336 QMLTNIENRLEELFEQIEIMPPERVEMAEKAKEKERRLRQREEKMEQQRLHQEDRVRRAL 395
Query: 376 ARSQTIPVRSGQNQGSRAR*KSCSPRSTGPNREAD 272
R+Q P R G +S P++ ++AD
Sbjct: 396 ERAQAEPKR---KTGKPLMFRSEPPQTRKKQQDAD 427
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = -3
Query: 562 QKQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVQGTRDSAQ 398
+K+++S LE++ EQL+++ + R DL+ E+ +L +R R + E+V ++ Q
Sbjct: 1325 EKKQMSSLESS-EQLSQIIEDKDRAIRDLKSELSELRERDRQSQEKVYHREEAIQ 1378
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -3
Query: 559 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLE 452
K+KIS LE + QL + +L+ +NA+ + + +LE
Sbjct: 419 KEKISDLEQKVNQLEREKSRLLEENAEFKVRMDELE 454
>SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = -3
Query: 559 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVQGTRDSAQGSKRRC 380
++K FLE +E ++ KQ N K +KRL + ++ GT + + +
Sbjct: 33 QKKSDFLEKKIENELQIAKQNASKNKRTALNALKRKKRLEKQLNQIDGTLSTIEFQREAL 92
Query: 379 NARSQTIPVRSGQNQGSRA 323
+ V + ++A
Sbjct: 93 EGANTNTEVLKNMSYAAKA 111
>SB_55696| Best HMM Match : SNF7 (HMM E-Value=0)
Length = 225
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -3
Query: 559 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVQGTRDSAQGSKRRC 380
++K +LE +E T K V+ N + + K +KRL + ++ GT + + +
Sbjct: 44 EKKQEYLEQRIEIETNTAKANVKKNKRIALQALKRKKRLEKQLSQIDGTLSTIEFQRDAL 103
Query: 379 -NARSQTIPVRS 347
N+ + T V+S
Sbjct: 104 ENSSTNTEVVKS 115
>SB_55695| Best HMM Match : SNF7 (HMM E-Value=0)
Length = 225
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -3
Query: 559 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVQGTRDSAQGSKRRC 380
++K +LE +E T K V+ N + + K +KRL + ++ GT + + +
Sbjct: 44 EKKQEYLEQRIEIETNTAKANVKKNKRIALQALKRKKRLEKQLSQIDGTLSTIEFQRDAL 103
Query: 379 -NARSQTIPVRS 347
N+ + T V+S
Sbjct: 104 ENSSTNTEVVKS 115
>SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = -3
Query: 559 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVQGTRDSAQGSKR-- 386
+QK++ E L ++ + + ++ +L ++ L RLR E ++ T +AQ +
Sbjct: 344 QQKLTDREVALSEVRRNEGSVKQEKENLESDMSTLRSRLRELQEIIENTEKAAQSNTELL 403
Query: 385 --RCNARSQTIPVRSGQNQGSRA 323
+ + R+Q + +N+ RA
Sbjct: 404 TSKLSTRTQEVNALRTENEELRA 426
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 115 TFIKFSTT*LQIASTFISSADDDRLPLDVLRGGGGSQH 228
TF F T+ Q SS DDR+P ++L G ++H
Sbjct: 29 TFGCFHTSHTQTTDKLPSSIQDDRVPAEILARGPEAEH 66
>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
Length = 429
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3
Query: 553 KISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLR 440
K L ++EQL ++L ++N+DLR + K E+++R
Sbjct: 291 KQGLLSQSIEQLEDKIRELKQENSDLRQLLDKAEEKIR 328
>SB_58| Best HMM Match : Prenyltrans (HMM E-Value=1.4e-16)
Length = 713
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 484 ADLRCEVPKLEKRLRATMERVQGTRDSAQGSKRRCNARSQTI 359
ADLR + +KR MER++ R+S + R ++ Q I
Sbjct: 407 ADLRARCAEGDKRENQLMERIEALRESDERHIRELTSKDQLI 448
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,377,342
Number of Sequences: 59808
Number of extensions: 282732
Number of successful extensions: 970
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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