Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F16
(794 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 33 0.22
At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zi... 32 0.50
At1g22275.1 68414.m02784 expressed protein 32 0.50
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 31 0.67
At1g22260.1 68414.m02782 expressed protein 31 0.88
At4g18570.1 68417.m02749 proline-rich family protein common fami... 31 1.2
At5g61865.1 68418.m07761 expressed protein 30 1.5
At3g55060.1 68416.m06115 expressed protein contains weak similar... 30 1.5
At5g61550.1 68418.m07724 protein kinase family protein contains ... 30 2.0
At4g13540.1 68417.m02111 expressed protein 30 2.0
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 29 3.6
At4g01170.1 68417.m00155 hypothetical protein 29 3.6
At3g21810.1 68416.m02750 zinc finger (CCCH-type) family protein ... 29 3.6
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 4.7
At1g77130.1 68414.m08985 glycogenin glucosyltransferase (glycoge... 29 4.7
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 28 6.2
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 28 6.2
At4g16900.1 68417.m02551 disease resistance protein (TIR-NBS-LRR... 28 8.2
At3g23930.1 68416.m03006 expressed protein 28 8.2
At2g32580.1 68415.m03978 expressed protein 28 8.2
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/75 (26%), Positives = 40/75 (53%)
Frame = -2
Query: 553 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDA 374
KQKI LE+ LE+ + + +++ D +PKL++ + + + E L+E K A
Sbjct: 350 KQKIKKLEDKLEKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLEEIKAIA 409
Query: 373 MRDRKRYQFEVDRIK 329
+ + Y+ E+ +I+
Sbjct: 410 KVETEGYRSELTKIR 424
>At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 31.9 bits (69), Expect = 0.50
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = -2
Query: 550 QKISFL-ENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDA 374
Q+++F+ EN +L K+ + +D+ L+ E + EK LRA E + + + +
Sbjct: 262 QRLNFMVENKQYRLKKLQIKYSQDSVKLKYETEEKEKILRAYSEDLTGRQQKSTDHFNRI 321
Query: 373 MRDRKRYQFEVD-RIKE-AVRAKNLARRGPQAQIAKPI 266
D ++ + +++ +IKE +R LA+R + + + I
Sbjct: 322 FADHEKQKVQLESQIKELEIRKLELAKREAENETQRKI 359
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 31.9 bits (69), Expect = 0.50
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = -2
Query: 541 SFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDAMRDR 362
S + L ++LV+D A +R ++ +L+ +ME V ALE L+ A ++ + R
Sbjct: 35 SVSSGSFSNLKLTAEKLVKDQAAMRTDLELANCKLKKSMEHVYALEEKLQSAFNENAKLR 94
Query: 361 KRYQFEVDRIKEAVRAK 311
R Q E +++ + +K
Sbjct: 95 VR-QKEDEKLWRGLESK 110
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 31.5 bits (68), Expect = 0.67
Identities = 26/89 (29%), Positives = 44/89 (49%)
Frame = -2
Query: 562 LAQKQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAK 383
+ QK I LE L++L + + L ++ LR V LEK L +ME+ E+ +
Sbjct: 274 IEQKGVIEELERKLDKLNETVRSLTKEEKVLRDLVIGLEKNLDESMEK----ESGMMVEI 329
Query: 382 DDAMRDRKRYQFEVDRIKEAVRAKNLARR 296
D ++R + EV+R+ + KNL +
Sbjct: 330 DALGKERTIKESEVERL---IGEKNLIEK 355
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -2
Query: 535 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRAT---MERVKALETALKEAKDD 377
+E E+ K + R+ DL+ EV K EK + T +E+VK +L AK+D
Sbjct: 437 VELRREEADKALDEEKRNGEDLKAEVLKSEKMVAKTLEELEKVKIERKSLFSAKND 492
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 31.1 bits (67), Expect = 0.88
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -2
Query: 556 QKQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDD 377
+K S + L ++LV+D A +R ++ +L+ +ME V ALE L+ A ++
Sbjct: 30 RKPPDSVSSGSFSNLKLTAEKLVKDQAAMRTDLELANCKLKKSMEHVYALEEKLQNAFNE 89
Query: 376 AMRDRKR 356
+ R R
Sbjct: 90 NAKLRVR 96
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Frame = -2
Query: 553 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETAL------- 395
+ +I+ +++L K +L DN LR E + E+ R R K +E +
Sbjct: 125 ESQIADKNGEIDELRKETARLAEDNERLRREFDRSEEMRRECETREKEMEAEIVELRKLV 184
Query: 394 -KEAKDDAMRDRKRYQFEVDRIKEAVRAKNLARRGPQAQIAKPI 266
E+ D A+ +R+Q +D ++ ++L R G + +PI
Sbjct: 185 SSESDDHALSVSQRFQGLMDVSAKSNLIRSLKRVGSLRNLPEPI 228
>At5g61865.1 68418.m07761 expressed protein
Length = 417
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 517 QLTKVHKQLVRDNADLRCEVPKLEKRLRATME-RVKALETALKEAKDDAMR 368
QL V ++ R N+D R E+ +R+R E ++ AL + LK+A+D R
Sbjct: 258 QLMNVVNEMERSNSDTRRELQDARERIRLAEETKINAL-SKLKKAEDQVQR 307
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -2
Query: 553 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDA 374
++K+ E +EQL VR N LRCEV L T +K L+ + + K+++
Sbjct: 745 REKLYSKEKEIEQLQAELAAAVRGNEILRCEVQSSLDNLSVTTHELKDLKHQMLK-KEES 803
Query: 373 MR 368
+R
Sbjct: 804 IR 805
>At5g61550.1 68418.m07724 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain;
protein kinase 1, PnPK1, Populus nigra, EMBL:AB041503
Length = 845
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/98 (20%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = -2
Query: 547 KISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDAMR 368
+I L L+ + +++ + ++ +L +R E++ L+ + AKD A +
Sbjct: 362 EIEKLRAELKHVQEMYAMAQTETVGASKKLTELNQRRFEESEKLVELKEKEEVAKDTASK 421
Query: 367 DRKRYQ---FEVDRIKEAVRAKNLARRGPQAQIAKPIR 263
+++RY+ E +++KE + + L RR + + + R
Sbjct: 422 EKQRYEEAMKEAEKVKELMMKEALHRREAEFKAERDAR 459
>At4g13540.1 68417.m02111 expressed protein
Length = 210
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = -2
Query: 487 RDNADLRCEVPKLEKRLRATMERVKALET---ALKEAKDDAMRDRKRYQFEVDRIKEAVR 317
R+++ R +V E+R R T + E ALK A+ + ++RKR + EV R+++ +
Sbjct: 10 RNSSKRRIKVKANEQRRRETRRELDEKERVILALKMAETEWRKERKRLREEVKRLRQKME 69
Query: 316 AK 311
K
Sbjct: 70 EK 71
>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
thaliana]
Length = 1505
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -2
Query: 454 KLEKRLRATMERVKALETALKEAKDDAMRDRKRYQFEVDRIKEAVRAKNLARRGP 290
+LEKR+R +E K E+A ++ + ++ K + E IKE AK +A P
Sbjct: 905 QLEKRIRTDLEEAKKQESAKAQSSLEELQ-LKCKETEALLIKEREAAKKIAETAP 958
>At4g01170.1 68417.m00155 hypothetical protein
Length = 444
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = -2
Query: 547 KISFLENNLEQLTKVHKQLVRDNADLRCEVPKLE---KRLRATMERVKALETALKEAKDD 377
KIS LEN +VH+Q R L+ E K++ +R ER K L AK
Sbjct: 68 KISKLENENPMKNRVHQQGQRKTVGLKAERDKIQDIIQRDNRVAERRKRRIAMLDAAK-- 125
Query: 376 AMRDRKRYQFEVDRIKEAVR 317
A RD + + + I++ VR
Sbjct: 126 ASRDVPLLETQQEDIQQRVR 145
>At3g21810.1 68416.m02750 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 437
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/88 (25%), Positives = 37/88 (42%)
Frame = -2
Query: 535 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDAMRDRKR 356
LE L+ + K L D L V + + R++ LET L KD+ R
Sbjct: 148 LEEQLKDVEMDVKMLTDDKLRLEASVERKAHEVDILTSRIQELETQLDREKDECRRITSS 207
Query: 355 YQFEVDRIKEAVRAKNLARRGPQAQIAK 272
+ V +RA++ +R +A++ K
Sbjct: 208 SKKFVKEYNRFLRAQDDLKRS-EARLQK 234
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = -2
Query: 550 QKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLE------KRLRATMERVKALETALKE 389
+K + LE+ E+L K+ +L + L + +++ + L++ + LE LKE
Sbjct: 473 RKTTMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKE 532
Query: 388 AKDDAMRDRKRYQFEVDRIK 329
DD + E DR+K
Sbjct: 533 ELDDLRAQKLEMLAEADRLK 552
>At1g77130.1 68414.m08985 glycogenin glucosyltransferase
(glycogenin)-related contains similarity to glycogenin-1
from Mus musculus [SP|Q9R062], Rattus norvegicus
[SP|O08730], Homo sapiens [SP|P46976]
Length = 618
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 575 LLGALFXIVRFLYPRLQV 628
+LGALF I RF YP LQ+
Sbjct: 46 MLGALFTIYRFRYPPLQI 63
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/92 (18%), Positives = 41/92 (44%)
Frame = -2
Query: 553 KQKISFLENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDA 374
+ +I LE + T V +QL N ++ + +LEK + + AL L++ +
Sbjct: 765 RARIIDLETEIASKTTVVEQLEAQNREMVARISELEKTMEERGTELSALTQKLEDNDKQS 824
Query: 373 MRDRKRYQFEVDRIKEAVRAKNLARRGPQAQI 278
+ E+D ++ + + ++ + + Q+
Sbjct: 825 SSSIETLTAEIDGLRAELDSMSVQKEEVEKQM 856
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/88 (26%), Positives = 44/88 (50%)
Frame = -2
Query: 535 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDAMRDRKR 356
+E N + K ++L+R+ E +L++ R +ER E L+ + A ++K+
Sbjct: 401 MERNERERRKEEERLMRERIK---EEERLQREQRREVER---REKFLQRENERA--EKKK 452
Query: 355 YQFEVDRIKEAVRAKNLARRGPQAQIAK 272
+ E+ R K+A+R K + +IAK
Sbjct: 453 QKDEIRREKDAIRRKLAIEKATARRIAK 480
>At4g16900.1 68417.m02551 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1072
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 535 LENNLEQLTKVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETAL 395
LE+N+ V K L+R D E+ L ++L ++R K+ ET L
Sbjct: 442 LEDNVGVTMLVEKSLIRITPDGDIEMHNLLEKLGIEIDRAKSKETVL 488
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -2
Query: 424 ERVKALETALKEAKDDAMRDRKRYQFEVDRIKEAVRAKNLAR 299
ER K + LKEA+ + ++RK+ + EV R+++ + + A+
Sbjct: 36 EREKVMFLQLKEAEREWRKERKKLREEVRRLRKKLEEREEAK 77
>At2g32580.1 68415.m03978 expressed protein
Length = 183
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = -2
Query: 508 KVHKQLVRDNADLRCEVPKLEKRLRATMERVKALETALKEAKDDAMRDRKRYQFEVDRIK 329
+V++ ++ A+L E +L++R A+ME+ K ++T L EAK + YQ E D+
Sbjct: 76 EVNEDTEKNYAELLTE--ELKQREAASMEKHKRVDTGLLEAK----KITSSYQKEADKCN 129
Query: 328 EAVRAKNLAR 299
+ AR
Sbjct: 130 SGMETCEEAR 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,397,289
Number of Sequences: 28952
Number of extensions: 237843
Number of successful extensions: 863
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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