Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F14
         (809 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3J1D0 Cluster: WblQ protein; n=1; Flavobacteria bacter...    36   1.2  
UniRef50_UPI0000F2E313 Cluster: PREDICTED: similar to NGEP; n=1;...    33   6.4  
UniRef50_A2E3S5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  

>UniRef50_A3J1D0 Cluster: WblQ protein; n=1; Flavobacteria bacterium
           BAL38|Rep: WblQ protein - Flavobacteria bacterium BAL38
          Length = 387

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = +2

Query: 161 KDISDNYLSKLSSNKLAVHSFNLVHVKHLFRLIIITYHNETSLQNY 298
           + I+  YLS++ ++K+ + S++L    H+F L +I   N T L+NY
Sbjct: 279 RSIAKRYLSEIKNDKITLPSWDLSK-NHVFHLFVIRTSNRTELKNY 323


>UniRef50_UPI0000F2E313 Cluster: PREDICTED: similar to NGEP; n=1;
            Monodelphis domestica|Rep: PREDICTED: similar to NGEP -
            Monodelphis domestica
          Length = 1137

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 511  WADGVILRLVWRLGGLARSAPRTQVKRPRRGPDLRSLTRHTDDPNL 648
            W DGV L    R  G AR+ P+   + P R P  R+ +R+   PN+
Sbjct: 1044 WTDGVGLVRPPRRPGQARAGPKEPPQVPVRSPPFRASSRNVSTPNV 1089


>UniRef50_A2E3S5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1026

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 10  FFFRSKYIQKIYQPCMTKFINVIHKYL*NSKTLQYCRIRL 129
           F  ++K +Q+++QP   + +N+ HK+   +    YCRI L
Sbjct: 96  FLQKAKNLQQVFQPLFDEIMNIYHKFDACTSQDDYCRISL 135


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,828,146
Number of Sequences: 1657284
Number of extensions: 12892026
Number of successful extensions: 31742
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31715
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)