Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F12
(825 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 32 0.49
SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014) 31 0.86
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 31 1.5
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 30 2.6
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 3.5
SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 29 4.6
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_38004| Best HMM Match : CXCXC (HMM E-Value=5.5e-08) 29 6.1
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 29 6.1
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/74 (29%), Positives = 30/74 (40%)
Frame = -3
Query: 799 RXXXPPYXSLEVXTXQRPVDRPTXIRA*XYPVHVESPTQCPYASQCPTKLRSPLTSPTRS 620
R P +L + P P + PV PT P S+ P R L +PTR+
Sbjct: 47 RIQAKPALNLPSPPSKTPSSVPPQAKVDETPVLPSPPTNTPRPSRIPRLKRRRLQTPTRT 106
Query: 619 K*RSPIRSPLKCQY 578
PI SP + Q+
Sbjct: 107 TTLPPIHSPPQDQH 120
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 32.3 bits (70), Expect = 0.49
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Frame = -3
Query: 694 SPTQCPYASQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTK--SSRKSLTP------ 539
SP + +S C + + +S+ RS RSP + +Y++ ++ R+S +P
Sbjct: 305 SPRRYRDSSSCRRRRSRSRSRSPKSRLRSRSRSPYRIRYRSRSRPPRGRRSQSPRRRRTR 364
Query: 538 --SKRKCLMKSKCLLTSPTRSTKE 473
S+R+C KS + +SP +S E
Sbjct: 365 SRSRRRCRSKSSSIASSPDKSKDE 388
>SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014)
Length = 351
Score = 31.5 bits (68), Expect = 0.86
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -3
Query: 658 TKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLM--KSKCLLTSPTR 485
TK + P T T++K RS R LKC L + K + KRK K K LL + +
Sbjct: 62 TKSKEPETDGTQNK-RSRKRKLLKCDQLLLPDTRLKPIGSKKRKVKQSSKKKTLLVNDSS 120
Query: 484 STKE--VQVPLVKE 449
S ++ PLVKE
Sbjct: 121 SDEDEPPPKPLVKE 134
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 712 YPVHVESPTQCPYASQCPTKLRSPL----TSPTRSK*RSPIRSPLKCQYQNLTKSSRKSL 545
Y H S + Y + K +SP SP R K RSP RSP K + + + S
Sbjct: 165 YRKHSPSVSPPIYKGREQLKSKSPKRTWSNSPFRHKSRSPFRSPQKERIPHQSPERLPSW 224
Query: 544 TPSKRKCLMKSKCLLTSPTRS 482
+P ++ K+ L+ P RS
Sbjct: 225 SPVRQSPFNKTHRRLSPPRRS 245
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -3
Query: 655 KLRSPLT----SPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPT 488
+LR+PL SP + RS + YQ LT ++ PS+ + + + L SPT
Sbjct: 2025 ELRTPLVTADISPEQPSPRSELEKRAISDYQPLTINASYHRRPSEPRIVSPAGSSLASPT 2084
Query: 487 RSTKEVQVPLVKEVPYPVKYHVPI 416
V + P V +H P+
Sbjct: 2085 SIATSVITGVTGLHPVTVSHHQPL 2108
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = -3
Query: 799 RXXXPPYXSLEVXTXQRPVDRPTXIRA*XYPVHVESPTQCPYASQCPTKLRSPLTSPTRS 620
R P +L + P P + P+ PT P S P R L +PT++
Sbjct: 87 RIPAKPALNLPSPPSKTPSSVPPQAKVDETPLLPSPPTSTPRPSHIPRLKRRRLQTPTKT 146
Query: 619 K*RSPIRSPLKCQY 578
PI SP + Q+
Sbjct: 147 TTLPPIHSPPQDQH 160
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 29.5 bits (63), Expect = 3.5
Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 14/113 (12%)
Frame = -3
Query: 709 PVHVESPTQCPYASQC---------PTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSS 557
PV V P CP +C PT + P T PT + SP +P
Sbjct: 130 PVMVPRPPVCPCKQECNFCCIEEEKPTTTKKPTTKPTPAPHSSPSPTPPPPPIIPPCPPV 189
Query: 556 RKSLTPSKRKCLMKSKCLLTS-----PTRSTKEVQVPLVKEVPYPVKYHVPIY 413
L P+ R C+ + P R V + VP PV+ VPI+
Sbjct: 190 INLLIPTARPCMPPPIIIHHHHHHPFPVRVPVRVPFRVPVRVPVPVRVPVPIH 242
>SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 340
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -3
Query: 709 PVHVESPTQC-PYASQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSK 533
P + P+ P+ S PTK P S +K P +S + TKS++ + +
Sbjct: 147 PTSTKQPSSSRPFKSTKPTKSTKPTKSTKATKSTKPTKSTKPTKPTKPTKSTKPTKSTKP 206
Query: 532 RKCLMKSKCLLTSPT 488
K ++ T+PT
Sbjct: 207 TKSTKPTESKPTAPT 221
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 697 ESPTQCPYASQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRK--SLTPSKRKC 524
+SPT P + + +SP SP R + RSP SP + L RK S PS R+
Sbjct: 911 DSPTPSPPPRR---RRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRA 967
Query: 523 LMK 515
K
Sbjct: 968 RRK 970
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 694 SPTQCPYASQCPTKLRSPLTSPTRSK*RSPIRSPLK---CQYQNLTKSSRKSLTPSK 533
+PTQCP + QCP L+ L P K R P + CQ++ + R L K
Sbjct: 295 APTQCPNSLQCPALLKMDL--PEHLKTCEHSRCPHQAYGCQFEGNNEQVRSHLETCK 349
>SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 882
Score = 28.7 bits (61), Expect = 6.1
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Frame = -3
Query: 694 SPTQCPYAS----QCPTKLRSPLTSP--TRSK*RSPIR--SPLKCQYQNLTKSSRKSLTP 539
S +CPY + +CP S L P S+ R P S L+C Y+N+++
Sbjct: 683 SELRCPYENVSELRCPFGNVSELRCPFGNVSELRCPYGNVSELRCPYENVSELRCPFGNV 742
Query: 538 SKRKCLMKSKCLLTSPTRSTKEVQVPLVKEVP 443
S+ +C + L P + E++ P E+P
Sbjct: 743 SELRCPFGNVSELRCPFGNVSELRCPFGNELP 774
>SB_38004| Best HMM Match : CXCXC (HMM E-Value=5.5e-08)
Length = 240
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 700 VESPTQCPYASQCPTKLRSPLTSPTRSK*RSPIRSP 593
VE PTQ P +Q PT ++P +PT++ ++P +SP
Sbjct: 204 VEPPTQAP--TQAPT--QAPTQAPTQAPTQAPTQSP 235
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 28.7 bits (61), Expect = 6.1
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -3
Query: 784 PYXSLEVXTXQRPVDRPTXIRA*XYPVHVESP--TQCPYASQCPTKLRSPLTSPTRSK*R 611
P S T P+ P+ + + P+ SP + P S P SPLTSP+
Sbjct: 178 PLTSSSPLTSPSPLTSPSPLTS-SSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSS 236
Query: 610 SPIRSPLKCQYQNLTKSSRKSLTPS 536
SP+ S + SS +PS
Sbjct: 237 SPLTSSSPLTSSSPLTSSSPLTSPS 261
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.3 bits (60), Expect = 8.0
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -2
Query: 242 FVVVFCVLIGCCEHYL 195
F++V+C+++GCC YL
Sbjct: 3 FMLVWCIVVGCCMAYL 18
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,027,065
Number of Sequences: 59808
Number of extensions: 320457
Number of successful extensions: 1009
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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