Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F11
         (841 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_58150| Best HMM Match : ig (HMM E-Value=3.7e-24)                    30   2.0  
SB_23441| Best HMM Match : IncA (HMM E-Value=2.5)                      30   2.7  
SB_22729| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_31145| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  

>SB_58150| Best HMM Match : ig (HMM E-Value=3.7e-24)
          Length = 456

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 695 EGXPKPYARWTRYG 736
           +G PKP+ +WTRYG
Sbjct: 46  DGLPKPFVKWTRYG 59


>SB_23441| Best HMM Match : IncA (HMM E-Value=2.5)
          Length = 927

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 710 VSDXLPLLYITXVPCSFSHISRPVQPCCCGCSASRD 603
           V+  +P+L++  +PC   ++S     CCC C   RD
Sbjct: 407 VAVAVPILFLISLPCLLVNMS-----CCCSCKPKRD 437


>SB_22729| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 426

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +1

Query: 49  TNHVYLLIPGNTMFVTRSCNCQQSHER 129
           +N V LLIPG+++    S NC++ H++
Sbjct: 17  SNQVKLLIPGSSVCPLNSLNCKEKHKQ 43


>SB_31145| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 98

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -3

Query: 296 IYETVEPPGYSVPVS--CGVKVKPGFEKYYVLSSFQCSSGCMYPNYTVVSLY*NVIISLS 123
           IY ++E PG +VP S  C V     F     L +++C       + T V  + ++++S+S
Sbjct: 10  IYASMETPGVAVPQSRICDVSTHDAFLLGQSLETYECKPN----DVTAVQCFVSILLSIS 65


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,689,043
Number of Sequences: 59808
Number of extensions: 429168
Number of successful extensions: 958
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)