Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F09
(811 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 126 2e-29
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 124 5e-29
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 124 9e-29
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 122 2e-28
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 122 2e-28
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 122 2e-28
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 121 5e-28
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 118 3e-27
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 114 7e-26
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 58 7e-09
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 53 3e-07
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 53 3e-07
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 53 3e-07
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 53 3e-07
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 53 3e-07
At2g34030.1 68415.m04166 calcium-binding EF hand family protein ... 29 2.8
At2g26800.3 68415.m03216 hydroxymethylglutaryl-CoA lyase, putati... 29 2.8
At2g26800.2 68415.m03215 hydroxymethylglutaryl-CoA lyase, putati... 29 2.8
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 28 8.4
At4g26110.1 68417.m03759 nucleosome assembly protein (NAP), puta... 28 8.4
At3g53980.2 68416.m05965 protease inhibitor/seed storage/lipid t... 28 8.4
At3g53980.1 68416.m05964 protease inhibitor/seed storage/lipid t... 28 8.4
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 28 8.4
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 126 bits (304), Expect = 2e-29
Identities = 60/105 (57%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
+IQ K ++ F IP VK++ CDIPPK + G + +R+SEQF+AMFRR
Sbjct: 333 NIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRR 392
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTEF 482
KAFLHWYTGEGMDEMEF EAESN+NDLV+EY QYQ+ATA+++ E+
Sbjct: 393 KAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEGEY 437
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 124 bits (300), Expect = 5e-29
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VK++ CDIPP + G + +R+SEQF+AMFRR
Sbjct: 333 NVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEMFRRVSEQFTAMFRR 392
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTEF 482
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQ+ATA+++ E+
Sbjct: 393 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEDEY 437
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 124 bits (298), Expect = 9e-29
Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VK+ CDIPP + G + +R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTEF 482
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQ+ATA+++ E+
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEY 436
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 122 bits (295), Expect = 2e-28
Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VK+ CDIPP + G + +R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTEF 482
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQ+ATA+++ ++
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDY 436
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 122 bits (295), Expect = 2e-28
Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VK+ CDIPP + G + +R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTEF 482
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQ+ATA+++ ++
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDY 436
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 122 bits (295), Expect = 2e-28
Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VK++ CDI P+ G + +R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTEF 482
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQ+ATA+D+ E+
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADDEGEY 436
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 121 bits (292), Expect = 5e-28
Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VK+ CDIPP + G + +R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDD 491
KAFLHWYTGEGMDEMEF EAESN+NDLVSEY QYQ+ATA+++
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE 433
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 118 bits (285), Expect = 3e-27
Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
+IQ K ++ F IP VK++ CDI PK + G + +R+SEQF+AMFRR
Sbjct: 332 NIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDD 491
KAFLHWYTGEGMDEMEF EAESN+NDLV+EY QYQ+ATA ++
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAGEE 433
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 114 bits (274), Expect = 7e-26
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = -1
Query: 793 SIQXK-TAVFXRGIPXXVKTARCDIPPKV*RCRLRLSGTRQPSRNYXKRISEQFSAMFRR 617
++Q K ++ F IP VK++ CDI P + G + +R+SEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDD 491
KAFLHWYTGEGMDEMEF EAESN+NDLV+EY QYQ+AT ++
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATVGEE 433
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 58.0 bits (134), Expect = 7e-09
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + AEDD E
Sbjct: 390 RIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGGEGAEDDDE 445
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + A DD E
Sbjct: 390 RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY-EEVGAEGGDDEE 444
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + A DD E
Sbjct: 390 RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY-EEVGAEGGDDEE 444
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + +D+ +
Sbjct: 390 RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGGDDEDD 445
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + +D+ +
Sbjct: 390 RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGGDDEDD 445
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = -1
Query: 652 RISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + +D+ +
Sbjct: 390 RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGGDDEDD 445
>At2g34030.1 68415.m04166 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 566
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 616 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
KAFL + G+ E+E NE E + L+ +Y E E+ TE
Sbjct: 343 KAFLEDFDGDNDGELEENEFEEGIARLLKQYKFNVEDQRENQTE 386
>At2g26800.3 68415.m03216 hydroxymethylglutaryl-CoA lyase, putative
/ 3-hydroxy-3-methylglutarate-CoA lyase, putative /
HMG-CoA lyase, putative similar to SP|P35915
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA
lyase) {Gallus gallus}; contains Pfam profile PF00682:
HMGL-like
Length = 355
Score = 29.5 bits (63), Expect = 2.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 254 RWSSVRRGHSAWCQHAT 304
+W+ VRR HS WC+ T
Sbjct: 2 QWNGVRRAHSIWCKRLT 18
>At2g26800.2 68415.m03215 hydroxymethylglutaryl-CoA lyase, putative
/ 3-hydroxy-3-methylglutarate-CoA lyase, putative /
HMG-CoA lyase, putative similar to SP|P35915
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA
lyase) {Gallus gallus}; contains Pfam profile PF00682:
HMGL-like
Length = 468
Score = 29.5 bits (63), Expect = 2.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 254 RWSSVRRGHSAWCQHAT 304
+W+ VRR HS WC+ T
Sbjct: 2 QWNGVRRAHSIWCKRLT 18
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 531 DTRSLTLLSASLNSISSMPSPVYQCKKALRLNMAENCSDIL 653
+ SLT L A ++ +PS + Q KK RL++ C +L
Sbjct: 714 ELESLTTLLADFTALREIPSTINQLKKLKRLSL-NGCKGLL 753
>At4g26110.1 68417.m03759 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 372
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 601 WYTGEGMDEMEFNEAESNVNDLVSEY*QYQEATAEDDTE 485
W+TGE M+ +F + +D+ + + E EDD +
Sbjct: 294 WFTGEAMEAEDFEIDDDEEDDIDEDEDEEDEEDEEDDDD 332
>At3g53980.2 68416.m05965 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 114
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/21 (52%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = +2
Query: 347 PEIALTMQRQCDFASK-VSYK 406
PE+ALT+ ++C+FA++ V YK
Sbjct: 87 PEVALTIPKRCNFANRPVGYK 107
>At3g53980.1 68416.m05964 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 114
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/21 (52%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = +2
Query: 347 PEIALTMQRQCDFASK-VSYK 406
PE+ALT+ ++C+FA++ V YK
Sbjct: 87 PEVALTIPKRCNFANRPVGYK 107
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this
gene; contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 314 ITHEKDRYDSTPEIALTMQRQCDFASKVSYKGHSK 418
IT E+ TP + + RQC + + V+ KG ++
Sbjct: 438 ITSEEKNIQDTPALGKVIVRQCGYTAVVNVKGQTQ 472
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,086,686
Number of Sequences: 28952
Number of extensions: 262156
Number of successful extensions: 677
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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