Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_F08
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 36 0.22
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 35 0.29
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 35 0.29
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 35 0.29
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 35 0.29
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 33 0.90
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 33 0.90
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 1.6
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 1.6
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 1.6
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 1.6
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 1.6
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 1.6
BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein ... 31 3.6
AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens ... 31 3.6
AK125327-1|BAC86131.1| 1281|Homo sapiens protein ( Homo sapiens ... 31 6.3
AB037830-1|BAA92647.2| 2461|Homo sapiens KIAA1409 protein protein. 31 6.3
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 35.5 bits (78), Expect = 0.22
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSK--RKCLM 520
PV P EVKSP SPT+ + +SP ++ K + KS K+ +P K K
Sbjct: 621 PVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKA--KSPEKEEAKSPEKAKSPVKAEAKSPE 678
Query: 519 KSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K+K + + +S ++ + P+ +E P K P+
Sbjct: 679 KAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 712
Score = 34.3 bits (75), Expect = 0.51
Identities = 20/90 (22%), Positives = 39/90 (43%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKC 508
P P E KSP + + K +SP++ K + + ++ +P++ K K+K
Sbjct: 581 PEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS 640
Query: 507 LLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
+S ++ + P +E P K P+
Sbjct: 641 PTKEEAKSPEKAKSPEKEEAKSPEKAKSPV 670
Score = 34.3 bits (75), Expect = 0.51
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKSLTPSKR-- 532
P PV E KSP SP + + +SP ++SP K + + KS K+ +P K
Sbjct: 601 PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEA 660
Query: 531 KCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K K+K + + +S ++ + P+ E P K P+
Sbjct: 661 KSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPV 698
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKC 508
P PV E KSP + K +SP + K + + ++ +P K K +K++
Sbjct: 615 PAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEA 674
Query: 507 LLTSPTRSTKEVQVPLVKEVPYPVK 433
+S + + ++ PVK
Sbjct: 675 KSPEKAKSPVKAEAKSPEKAKSPVK 699
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -2
Query: 663 PYEVKSP--LTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPT 490
P EVKSP SP + + +SP + K + KS + +P K K K + +
Sbjct: 541 PAEVKSPEKAKSPAKEEAKSPPEA--KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 598
Query: 489 RSTKEVQVPLVKEVPYPVKYHVPI 418
+S ++ + P+ +E P + P+
Sbjct: 599 KSPEKAKSPVKEEAKSPAEAKSPV 622
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 35.1 bits (77), Expect = 0.29
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKSLTPSK--R 532
PV P EVKSP SPT+ + +SP +SP K + + KS K+ +P K
Sbjct: 621 PVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEA 680
Query: 531 KCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K K+K + + +S ++ + P+ +E P K P+
Sbjct: 681 KSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 718
Score = 34.7 bits (76), Expect = 0.39
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPSKRKCLM 520
P PV E KSP SP + + +SP ++SP K ++ TK KS P K K
Sbjct: 601 PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKA--KSPTKEEAKS--PEKAKSPE 656
Query: 519 KSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K+K +S ++ + P+ E P K P+
Sbjct: 657 KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPV 690
Score = 34.7 bits (76), Expect = 0.39
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKC 508
P PV E KSP + K +SP + K + + KS + K K+K
Sbjct: 615 PAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKS 674
Query: 507 LLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
+ + +S ++ + P+ E P K P+
Sbjct: 675 PVKAEAKSPEKAKSPVKAEAKSPEKAKSPV 704
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -2
Query: 663 PYEVKSP--LTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPT 490
P EVKSP SP + + +SP + K + KS + +P K K K + +
Sbjct: 541 PAEVKSPEKAKSPAKEEAKSPPEA--KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 598
Query: 489 RSTKEVQVPLVKEVPYPVKYHVPI 418
+S ++ + P+ +E P + P+
Sbjct: 599 KSPEKAKSPVKEEAKSPAEAKSPV 622
Score = 30.7 bits (66), Expect = 6.3
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPI----RSP--LKCQYQNLTKSSRKSLTPSKRKC 526
P P E KSP + + K +SP+ +SP K + KS + +P K K
Sbjct: 581 PEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS 640
Query: 525 LMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K + +S ++ + P +E P K P+
Sbjct: 641 PTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPV 676
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.29
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKSLTPSK--R 532
PV P EVKSP SPT+ + +SP +SP K + + KS K+ +P K
Sbjct: 16 PVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEA 75
Query: 531 KCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K K+K + + +S ++ + P+ +E P K P+
Sbjct: 76 KSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 113
Score = 34.7 bits (76), Expect = 0.39
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKC 508
P PV E KSP + K +SP + K + + KS + K K+K
Sbjct: 10 PAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKS 69
Query: 507 LLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
+ + +S ++ + P+ E P K P+
Sbjct: 70 PVKAEAKSPEKAKSPVKAEAKSPEKAKSPV 99
Score = 33.5 bits (73), Expect = 0.90
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = -2
Query: 669 PVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLL 502
PV E KSP SP + + +SP ++SP K ++ TK KS P K K K+K
Sbjct: 2 PVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKA--KSPTKEEAKS--PEKAKSPEKAKSPE 57
Query: 501 TSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
+S ++ + P+ E P K P+
Sbjct: 58 KEEAKSPEKAKSPVKAEAKSPEKAKSPV 85
Score = 31.1 bits (67), Expect = 4.8
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRS--K*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKS 514
PV P + KSP+ +S K +SP++ K + + ++ TP K K +K
Sbjct: 84 PVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKE 143
Query: 513 KCLLTSPTRSTKEVQVPLVKEVPYPVK 433
+ E ++P +EV PVK
Sbjct: 144 EA-------KAPEKEIPKKEEVKSPVK 163
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 35.1 bits (77), Expect = 0.29
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKSLTPSK--R 532
PV P EVKSP SPT+ + +SP +SP K + + KS K+ +P K
Sbjct: 621 PVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEA 680
Query: 531 KCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K K+K + + +S ++ + P+ +E P K P+
Sbjct: 681 KSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 718
Score = 34.7 bits (76), Expect = 0.39
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPSKRKCLM 520
P PV E KSP SP + + +SP ++SP K ++ TK KS P K K
Sbjct: 601 PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKA--KSPTKEEAKS--PEKAKSPE 656
Query: 519 KSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K+K +S ++ + P+ E P K P+
Sbjct: 657 KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPV 690
Score = 34.7 bits (76), Expect = 0.39
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKC 508
P PV E KSP + K +SP + K + + KS + K K+K
Sbjct: 615 PAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKS 674
Query: 507 LLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
+ + +S ++ + P+ E P K P+
Sbjct: 675 PVKAEAKSPEKAKSPVKAEAKSPEKAKSPV 704
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -2
Query: 663 PYEVKSP--LTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPT 490
P EVKSP SP + + +SP + K + KS + +P K K K + +
Sbjct: 541 PAEVKSPEKAKSPAKEEAKSPPEA--KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 598
Query: 489 RSTKEVQVPLVKEVPYPVKYHVPI 418
+S ++ + P+ +E P + P+
Sbjct: 599 KSPEKAKSPVKEEAKSPAEAKSPV 622
Score = 30.7 bits (66), Expect = 6.3
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPI----RSP--LKCQYQNLTKSSRKSLTPSKRKC 526
P P E KSP + + K +SP+ +SP K + KS + +P K K
Sbjct: 581 PEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS 640
Query: 525 LMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K + +S ++ + P +E P K P+
Sbjct: 641 PTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPV 676
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 35.1 bits (77), Expect = 0.29
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQ--YQNLTKSSRKSLTPSK--R 532
PV P EVKSP SPT+ + +SP +SP K + + KS K+ +P K
Sbjct: 629 PVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEA 688
Query: 531 KCLMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K K+K + + +S ++ + P+ +E P K P+
Sbjct: 689 KSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 726
Score = 34.7 bits (76), Expect = 0.39
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSP--LTSPTRSK*RSP--IRSPLKCQYQNLTKSSRKSLTPSKRKCLM 520
P PV E KSP SP + + +SP ++SP K ++ TK KS P K K
Sbjct: 609 PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKA--KSPTKEEAKS--PEKAKSPE 664
Query: 519 KSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K+K +S ++ + P+ E P K P+
Sbjct: 665 KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPV 698
Score = 34.7 bits (76), Expect = 0.39
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKC 508
P PV E KSP + K +SP + K + + KS + K K+K
Sbjct: 623 PAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKS 682
Query: 507 LLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
+ + +S ++ + P+ E P K P+
Sbjct: 683 PVKAEAKSPEKAKSPVKAEAKSPEKAKSPV 712
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -2
Query: 663 PYEVKSP--LTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPT 490
P EVKSP SP + + +SP + K + KS + +P K K K + +
Sbjct: 549 PAEVKSPEKAKSPAKEEAKSPPEA--KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 606
Query: 489 RSTKEVQVPLVKEVPYPVKYHVPI 418
+S ++ + P+ +E P + P+
Sbjct: 607 KSPEKAKSPVKEEAKSPAEAKSPV 630
Score = 30.7 bits (66), Expect = 6.3
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = -2
Query: 687 PVTVHKPVPYEVKSPLTSPTRSK*RSPI----RSP--LKCQYQNLTKSSRKSLTPSKRKC 526
P P E KSP + + K +SP+ +SP K + KS + +P K K
Sbjct: 589 PEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS 648
Query: 525 LMKSKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVPI 418
K + +S ++ + P +E P K P+
Sbjct: 649 PTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPV 684
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 33.5 bits (73), Expect = 0.90
Identities = 24/92 (26%), Positives = 36/92 (39%)
Frame = -2
Query: 696 KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMK 517
KP P T +P P K P + T+ + + P + ++ K LTP+ + L
Sbjct: 575 KPAPTTPKEPAPTTPKEPAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAP 634
Query: 516 SKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVP 421
+ +PT T E P E P P P
Sbjct: 635 TTPEKPAPT--TPEELAPTTPEEPTPTTPEEP 664
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 33.5 bits (73), Expect = 0.90
Identities = 24/92 (26%), Positives = 36/92 (39%)
Frame = -2
Query: 696 KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMK 517
KP P T +P P K P + T+ + + P + ++ K LTP+ + L
Sbjct: 575 KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAP 634
Query: 516 SKCLLTSPTRSTKEVQVPLVKEVPYPVKYHVP 421
+ +PT T E P E P P P
Sbjct: 635 TTPEKPAPT--TPEELAPTTPEEPTPTTPEEP 664
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 765 PXKSNTSRQPYXDXXLXXPRPC*KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKC 586
P +S+T +P L R P P+ P+ E +P + + ++ RSP +SP K
Sbjct: 354 PERSSTGPEPPAPTPLLAERHGGSPQPLAT-TPLSQEPVNPPSEASPTRDRSPPKSPEKL 412
Query: 585 QYQNLTKSSRKSLTPSK 535
+ ++SS S P+K
Sbjct: 413 PQSSSSESSPPSPQPTK 429
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 765 PXKSNTSRQPYXDXXLXXPRPC*KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKC 586
P +S+T +P L R P P+ P+ E +P + + ++ RSP +SP K
Sbjct: 354 PERSSTGPEPPAPTPLLAERHGGSPQPLAT-TPLSQEPVNPPSEASPTRDRSPPKSPEKL 412
Query: 585 QYQNLTKSSRKSLTPSK 535
+ ++SS S P+K
Sbjct: 413 PQSSSSESSPPSPQPTK 429
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 765 PXKSNTSRQPYXDXXLXXPRPC*KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKC 586
P +S+T +P L R P P+ P+ E +P + + ++ RSP +SP K
Sbjct: 354 PERSSTGPEPPAPTPLLAERHGGSPQPLAT-TPLSQEPVNPPSEASPTRDRSPPKSPEKL 412
Query: 585 QYQNLTKSSRKSLTPSK 535
+ ++SS S P+K
Sbjct: 413 PQSSSSESSPPSPQPTK 429
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 765 PXKSNTSRQPYXDXXLXXPRPC*KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKC 586
P +S+T +P L R P P+ P+ E +P + + ++ RSP +SP K
Sbjct: 319 PERSSTGPEPPAPTPLLAERHGGSPQPLAT-TPLSQEPVNPPSEASPTRDRSPPKSPEKL 377
Query: 585 QYQNLTKSSRKSLTPSK 535
+ ++SS S P+K
Sbjct: 378 PQSSSSESSPPSPQPTK 394
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 765 PXKSNTSRQPYXDXXLXXPRPC*KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKC 586
P +S+T +P L R P P+ P+ E +P + + ++ RSP +SP K
Sbjct: 144 PERSSTGPEPPAPTPLLAERHGGSPQPLAT-TPLSQEPVNPPSEASPTRDRSPPKSPEKL 202
Query: 585 QYQNLTKSSRKSLTPSK 535
+ ++SS S P+K
Sbjct: 203 PQSSSSESSPPSPQPTK 219
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 765 PXKSNTSRQPYXDXXLXXPRPC*KPYPVTVHKPVPYEVKSPLTSPTRSK*RSPIRSPLKC 586
P +S+T +P L R P P+ P+ E +P + + ++ RSP +SP K
Sbjct: 402 PERSSTGPEPPAPTPLLAERHGGSPQPLAT-TPLSQEPVNPPSEASPTRDRSPPKSPEKL 460
Query: 585 QYQNLTKSSRKSLTPSK 535
+ ++SS S P+K
Sbjct: 461 PQSSSSESSPPSPQPTK 477
>BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein 9
protein.
Length = 1031
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 576 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKE 475
+L S+RKS TP+KR+ ++ + SP RS KE
Sbjct: 806 SLPPSNRKSSTPTKREIMLTPVTVAYSPKRSPKE 839
>AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens
cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar to
PARAMYOSIN. ).
Length = 692
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 576 NLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTKE 475
+L S+RKS TP+KR+ ++ + SP RS KE
Sbjct: 602 SLPPSNRKSSTPTKREIMLTPVTVAYSPKRSPKE 635
>AK125327-1|BAC86131.1| 1281|Homo sapiens protein ( Homo sapiens
cDNA FLJ43337 fis, clone NT2RI3007158. ).
Length = 1281
Score = 30.7 bits (66), Expect = 6.3
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 666 VPYEVKSPLTSPTRSK*RSPIRSPLKCQYQN 574
V + + SP SP +S RSP+RSP + ++N
Sbjct: 571 VQHNMLSPFHSPFQSPFRSPLRSPFRSPFKN 601
>AB037830-1|BAA92647.2| 2461|Homo sapiens KIAA1409 protein protein.
Length = 2461
Score = 30.7 bits (66), Expect = 6.3
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 666 VPYEVKSPLTSPTRSK*RSPIRSPLKCQYQN 574
V + + SP SP +S RSP+RSP + ++N
Sbjct: 552 VQHNMLSPFHSPFQSPFRSPLRSPFRSPFKN 582
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,879,536
Number of Sequences: 237096
Number of extensions: 1672466
Number of successful extensions: 7665
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7607
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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