Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_F06
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    24   1.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 276 SIFSVYYRNLVAHDFVVVFCVLIGCCEHYL 187
           +IFSV     +A  FV +FC L  C   Y+
Sbjct: 236 TIFSVPLLMKIASQFVGIFCSLYFCIFGYI 265


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 276 SIFSVYYRNLVAHDFVVVFCVLIGCCEHYL 187
           +IFSV     +A  FV +FC L  C   Y+
Sbjct: 61  TIFSVPLLMKIASQFVGIFCSLYFCIFGYI 90


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 159 DLYTRENVALNNAHNNQLIHRTQPQ 233
           D    +N   N  HNN++ HR + +
Sbjct: 28  DCDKNQNTEQNYTHNNEMYHRVKEE 52


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 159 DLYTRENVALNNAHNNQLIHRTQPQ 233
           D    +N   N  HNN++ HR + +
Sbjct: 28  DCDKNQNTEQNYTHNNEMYHRVKEE 52


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/47 (23%), Positives = 19/47 (40%)
 Frame = -3

Query: 674 RTVHKPVPYELRSPLTALQGRSREALSGPR*SASTKTLRSHQENPLH 534
           R   + +PY    P   +  R R +L GP+     +  R    + +H
Sbjct: 73  RAAAQGMPYPRFPPYDRMDIRDRRSLHGPQQQMDGQEYRPDSPSSMH 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,092
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)