Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_E07
         (816 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g22720.2 68417.m03278 glycoprotease M22 family protein simila...    29   3.7  
At4g22720.1 68417.m03277 glycoprotease M22 family protein simila...    29   3.7  
At4g00890.1 68417.m00120 proline-rich family protein contains pr...    29   4.9  

>At4g22720.2 68417.m03278 glycoprotease M22 family protein similar
           to sialylglycoprotease [Haemophilus ducreyi] GI:6942294;
           contains Pfam profile PF00814: Glycoprotease family
          Length = 353

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -3

Query: 193 PXXXNIHPHGHPFHPQETTAPHMLVLYLPRLKIRIRHIQAYPKE 62
           P    I P GH F P+E TA H L   LP +K  +   Q  P+E
Sbjct: 32  PRHTYITPPGHGFLPRE-TAHHHLDHVLPLVKSALETSQVTPEE 74


>At4g22720.1 68417.m03277 glycoprotease M22 family protein similar
           to sialylglycoprotease [Haemophilus ducreyi] GI:6942294;
           contains Pfam profile PF00814: Glycoprotease family
          Length = 353

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -3

Query: 193 PXXXNIHPHGHPFHPQETTAPHMLVLYLPRLKIRIRHIQAYPKE 62
           P    I P GH F P+E TA H L   LP +K  +   Q  P+E
Sbjct: 32  PRHTYITPPGHGFLPRE-TAHHHLDHVLPLVKSALETSQVTPEE 74


>At4g00890.1 68417.m00120 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 431

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 176 TSTRPPVSSPGDYCSPHARLVSSKAQDKNSSHPGLPKGEPN 54
           +S + P+ SP    +P     S  +Q   S  P LP+ EPN
Sbjct: 296 SSLKSPIPSPATITAPPPPFSSPLSQTTPSPKPSLPQIEPN 336


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,376,690
Number of Sequences: 28952
Number of extensions: 98477
Number of successful extensions: 319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)