Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_D03
         (796 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7681| Best HMM Match : Annexin (HMM E-Value=0)                     113   1e-25
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)                62   5e-10
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)                 55   8e-08
SB_26806| Best HMM Match : Annexin (HMM E-Value=0)                     50   2e-06
SB_37033| Best HMM Match : Annexin (HMM E-Value=0)                     48   7e-06
SB_47771| Best HMM Match : Annexin (HMM E-Value=0)                     47   2e-05
SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07)              29   3.3  
SB_16901| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13)               29   5.7  

>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 426

 Score =  113 bits (273), Expect = 1e-25
 Identities = 54/109 (49%), Positives = 79/109 (72%)
 Frame = -1

Query: 598 RWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVK 419
           +WGTDES FN +L +RS+ QL+  F EY  ++ +DI +SI +E SG ++ G+    +C +
Sbjct: 28  KWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNSIDREMSGDLKAGL----QCAR 83

Query: 418 SKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 272
           +   +FA+RL+ SMKG GT+D  LIR+VVSRSE+DL +IK +FL+KY K
Sbjct: 84  NPAEYFADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHK 132


>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
          Length = 803

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 28/74 (37%), Positives = 43/74 (58%)
 Frame = -1

Query: 595 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 416
           WGTDE  F  +   RS+ Q+  + AEY+ LT  +IE+SI KE  G ++K  L + K  + 
Sbjct: 137 WGTDEGAFIRVFTQRSFTQISAMCAEYKKLTKVEIEESIDKEMDGDMQKAFLTLVKISRD 196

Query: 415 KVGFFAERLYYSMK 374
             GF  ++L  ++K
Sbjct: 197 PTGFQGDKLKAAVK 210



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = -1

Query: 595 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 416
           +GTDE    SIL TRS +  R    E       DI    KK+    +E G+ +      +
Sbjct: 91  FGTDEDALISILCTRSNKGQRDESKE------ADIH-LAKKDAKDLMEAGVASWGTDEGA 143

Query: 415 KVGFFAERLYYSMKGIGTNDKTLIRIVVSRS---EIDLGDIKQAFL 287
            +  F +R +  +  +    K L ++ +  S   E+D GD+++AFL
Sbjct: 144 FIRVFTQRSFTQISAMCAEYKKLTKVEIEESIDKEMD-GDMQKAFL 188


>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
          Length = 146

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 32/89 (35%), Positives = 55/89 (61%)
 Frame = -1

Query: 589 TDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKV 410
           T+E+    IL  RS  Q  +I   Y+ + GKD+ + +K E SG++E+ +LA+   ++  V
Sbjct: 2   TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAM---MEPSV 58

Query: 409 GFFAERLYYSMKGIGTNDKTLIRIVVSRS 323
            + A+ L   M+G GT+++TLI I+ +RS
Sbjct: 59  LYDAKCLRRGMRGAGTDEETLIDILCTRS 87



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -1

Query: 598 RWGTDESIFNSILITRSYQQLRQIFAEY 515
           +WGTDES FN +L +RS+ QL+  F EY
Sbjct: 117 KWGTDESRFNVVLASRSFPQLQATFNEY 144



 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -2

Query: 768 YEQLYGKSLXSDLKGDTSGHFKRLCVSL 685
           Y+ +YGK L +DLK + SG+ +   +++
Sbjct: 26  YKTMYGKDLMNDLKSELSGNLEECLLAM 53


>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 829

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 28/109 (25%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
 Frame = -1

Query: 589 TDESIFNSILITRSYQQ--LRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIA-KCVK 419
           +D+    +I+++ +  +  L+++  EY     KD+ + +  + +  + + + ++     K
Sbjct: 456 SDKKTTTAIIVSNASDEGKLKKLNDEYNKRYKKDLVEQLDGKVAIDVHEAVTSLLLPATK 515

Query: 418 SKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGK 272
           + V      LYY+MKG+GT +  LI I+ +RS  ++ +IKQ + +KYG+
Sbjct: 516 ADV----RSLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGR 560



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
 Frame = -1

Query: 598 RWGTDESIFNSILITRSYQQLRQIFAEYEALT-GKDIEDSIKKEFSGSIEKGMLAIAKCV 422
           RWGTDE  F +IL  RS   ++ + AEY+ L+ G  + D+++ E  G +   +L +    
Sbjct: 611 RWGTDEDQFITILSQRSSAHVQAVLAEYKTLSGGVSLADTVRDEMKGDLRDALLVLISYG 670

Query: 421 KSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKY 278
           +      A++L  ++    T   T+ RIV    +  L D++ ++   Y
Sbjct: 671 QDPSQAAADKLNAALHDGDT--VTVARIVAGTQQGPLADLEASYNATY 716



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -1

Query: 598 RWGTDESIFNSILITRSYQQLRQIFAEY 515
           +WGTDE  F  I  TRSY QL+ +F EY
Sbjct: 185 KWGTDEDCFIEIFTTRSYPQLQAMFPEY 212



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -2

Query: 768 YEQLYGKSLXSDLKGDTSGHFKRLCVSLCMANRDEN 661
           Y + YG+SL  D+K +TSG F+ L  +L   +RDE+
Sbjct: 554 YNKKYGRSLTDDMKSETSGDFENLLETLLKGSRDES 589



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = -1

Query: 592 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAK 428
           GT E+    IL TRS  ++++I  EY    G+ + D +K E SG  E  +  + K
Sbjct: 529 GTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLETLLK 583



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -1

Query: 598 RWGTDESIFNSILITRSYQQLRQIFAEYEALT-GKDIEDSIKKE 470
           RWGT+E  F +IL  RS   ++ + AEY  L+ G  + D+I+ E
Sbjct: 784 RWGTEEDQFITILTQRSSAHVQAVLAEYRTLSGGVTLADTIRDE 827



 Score = 31.5 bits (68), Expect = 0.81
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -2

Query: 768 YEQLYGKSLXSDLKGDTSGHFKRLCVSL 685
           Y++ YG SL  D+K +TSG F+ L V+L
Sbjct: 95  YQKKYGCSLEDDVKEETSGDFEDLLVAL 122


>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 287

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 26/101 (25%), Positives = 54/101 (53%)
 Frame = -1

Query: 592 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 413
           G D      +L +R+  Q ++I  EY+ + G+D+   +K E  G  E  ++A+   +   
Sbjct: 101 GCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIAL---MTPP 157

Query: 412 VGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAF 290
             + A  L  ++KG+GT++  LI ++ +R+  ++  I+ A+
Sbjct: 158 AEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAY 198



 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = -1

Query: 598 RWGTDESIFNSILITRSYQQLRQIFAEY 515
           RWGTDES FNSIL +RS+ QLR  F EY
Sbjct: 236 RWGTDESKFNSILASRSFDQLRATFNEY 263



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 768 YEQLYGKSLXSDLKGDTSGHFKRLCVSLCMA 676
           Y  L+ + L  D+ GDTSG FK+  +SLC A
Sbjct: 198 YNTLFSRDLEKDIAGDTSGKFKKFLISLCNA 228



 Score = 36.7 bits (81), Expect = 0.022
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = -1

Query: 592 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCV 422
           GTDE++   +L TR+  ++  I   Y  L  +D+E  I  + SG  +K ++++   +
Sbjct: 173 GTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIAGDTSGKFKKFLISLCNAL 229



 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/63 (22%), Positives = 31/63 (49%)
 Frame = -2

Query: 768 YEQLYGKSLXSDLKGDTSGHFKRLCVSLCMANRDENXASMKAQLKPMLKHWPPLVKVDGE 589
           Y+ ++G+ L  DLK +  G+F+   ++L     + +   ++  +K +      L++V   
Sbjct: 126 YKTMFGRDLIKDLKSEVGGYFEDTVIALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTT 185

Query: 588 PTN 580
            TN
Sbjct: 186 RTN 188


>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 529

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 32/55 (58%)
 Frame = -1

Query: 598 RWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 434
           +WGTDES+F  IL  RS  QLR ++  Y+ +   DI ++I  E +G     + AI
Sbjct: 417 KWGTDESVFTKILTCRSDLQLRALYQAYQHVAKCDILETIDDELTGDYHDAVKAI 471



 Score = 37.5 bits (83), Expect = 0.012
 Identities = 22/85 (25%), Positives = 43/85 (50%)
 Frame = -1

Query: 541 QLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGT 362
           +L+++  EY     KD+ + +  + +  + +   A+   +          LYY+MKG+GT
Sbjct: 77  KLKKLSDEYNKRYEKDLVEQLDGKVADDVHE---AVTSLLLPATQADVRSLYYAMKGLGT 133

Query: 361 NDKTLIRIVVSRSEIDLGDIKQAFL 287
            +  LI  + +RS  + GD++ A L
Sbjct: 134 KEAQLIETLCTRS--NTGDLRDALL 156



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = -1

Query: 595 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 434
           +G+DE     +L + + +Q   I   ++    KD+ + +K E SG  E  ++A+
Sbjct: 318 FGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDAIVAL 371


>SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07)
          Length = 659

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +2

Query: 143 SYTLKRQLLETFVVLLLCSYETRVSNTRLKSPFVSSAIQVSRXLAVLLEECLL 301
           S  L+ + L T V L LC++   VS +RL+    S AIQV   L+ ++ + +L
Sbjct: 116 SAPLRHEALITAVCLCLCAWVKAVSFSRLEFRAASHAIQVVSALSGIVYKKML 168


>SB_16901| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 909

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = +3

Query: 300 LMSPRSI--SERLTTMRMSVLSLVPMPFIE*YRRSAKKPTLLFTHLAIA-SMPFSMLPEN 470
           L+SP+ +  S  +T ++   + ++  PFI    R+  KP L  +HL  A +MP+    +N
Sbjct: 603 LVSPKLVLSSAMMTAIQYGRVQIIGKPFIPDAIRTTHKPLLSVSHLIRACAMPYLGRHDN 662

Query: 471 SFLIESS 491
              I SS
Sbjct: 663 KNGISSS 669


>SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13)
          Length = 405

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 587 RRINLQLHPYHSLLSAAETDLRRVRSFD-RKRH*GLDQERILW 462
           R +NL L P H +     +D ++ +  D  K   GLD++ +LW
Sbjct: 12  RDVNLTLSPAHMMAKGRNSDKQKEKDKDAEKDKDGLDRKYLLW 54


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,377,255
Number of Sequences: 59808
Number of extensions: 451523
Number of successful extensions: 1207
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)