Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_C11
(808 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 146 2e-35
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 74 2e-13
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-11
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 65 7e-11
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 65 7e-11
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 62 4e-10
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 62 4e-10
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 60 2e-09
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 60 3e-09
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 60 3e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 58 6e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 55 6e-08
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 53 3e-07
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 50 2e-06
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 47 2e-05
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 47 2e-05
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 47 2e-05
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 47 2e-05
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 46 4e-05
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 45 8e-05
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 41 0.001
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 41 0.001
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 36 0.051
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 33 0.21
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 33 0.21
SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) 33 0.27
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_41473| Best HMM Match : Shugoshin_C (HMM E-Value=8.2) 31 0.83
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 31 0.83
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 31 1.1
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 31 1.5
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_21899| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 29 4.4
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 29 4.4
SB_58701| Best HMM Match : bZIP_2 (HMM E-Value=1.6) 29 5.9
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 29 5.9
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 29 5.9
SB_50861| Best HMM Match : Borrelia_orfA (HMM E-Value=4.4) 28 7.7
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26) 28 7.7
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 146 bits (353), Expect = 2e-35
Identities = 71/125 (56%), Positives = 89/125 (71%)
Frame = -1
Query: 478 RMGLAISLVSTVPEKVWYHGEWCSSRGRNCWNTNLIDDKPKGCCMWYNEPQYLADIEDHL 299
RMGLA+SLVS V EKVWYH C +RG+ C+NT L D GC +WYNE QYLAD+EDHL
Sbjct: 478 RMGLALSLVSDVKEKVWYHT--CPNRGKGCFNTRLKDQG--GCSIWYNETQYLADVEDHL 533
Query: 298 NITIQQVETDMKVPSNEFDGKVVYGEKRKQAGSGYQDHVSQMAPVVKSLQELESQAQLYY 119
TI ++ DMKV SNEFDGKVVYG KR + G+ +Q H +++AP V+ L LE QAQ +
Sbjct: 534 GETIPVIQPDMKVASNEFDGKVVYGAKRGK-GAVFQTHTAELAPSVQELAALEQQAQTSF 592
Query: 118 LKMHH 104
+ + H
Sbjct: 593 IDLMH 597
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 73.7 bits (173), Expect = 2e-13
Identities = 38/96 (39%), Positives = 56/96 (58%)
Frame = -1
Query: 736 DCDNLERYFKTFGNELSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGL 557
+C L F G L+CV L ER L FK+ +K L+ TDVA+RG+DI +
Sbjct: 259 NCQVLVSMFHKLG--LTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQV 316
Query: 556 PFMINITLPDEKSNYVHRIGRVGRAERMGLAISLVS 449
++N +P + +Y+HR+GR RA R G+AIS+V+
Sbjct: 317 ELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVT 352
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/76 (44%), Positives = 44/76 (57%)
Frame = -1
Query: 685 CVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVH 506
C + GDR +ER++ L F+ L+ T VAARG+DI + +IN LP + YVH
Sbjct: 1127 CTSIHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVH 1186
Query: 505 RIGRVGRAERMGLAIS 458
RIGR GR GLA S
Sbjct: 1187 RIGRTGRVGHTGLATS 1202
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = -1
Query: 676 LXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIG 497
+ GD KER+ ++ F+ Q + LI TDV ARG+D+ + +IN LP+ + Y+HRIG
Sbjct: 266 MHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIG 325
Query: 496 RVGRAERMGLAISLVST 446
R GR R G+AI+ V +
Sbjct: 326 RSGRFGRKGVAINFVKS 342
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = -1
Query: 700 GNELSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEK 521
G + GDR +ER++ L+ F+ + LI T+VAARG+DI + +IN LP +
Sbjct: 984 GEGFPTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDI 1043
Query: 520 SNYVHRIGRVGRAERMGLA 464
YVHRIGR GR G A
Sbjct: 1044 DEYVHRIGRTGRIGNKGKA 1062
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = -1
Query: 652 ERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAERM 473
+R+ L+ FK + LI TDVA+RG+DI + ++IN P +YVHR+GR GRA R
Sbjct: 80 DREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGRAGRS 139
Query: 472 GLAISLVS 449
G +++ +S
Sbjct: 140 GTSLTFIS 147
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = -1
Query: 694 ELSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSN 515
+L+ + L + ++R NL+ FK S L+ TDVAARG+DI+ + +I+ +P +
Sbjct: 480 QLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAARGLDIANIEHVIHYQVPKDPEV 539
Query: 514 YVHRIGRVGRAERMGLAISLV 452
YVHR GR RA GL++ LV
Sbjct: 540 YVHRSGRTARASHEGLSVVLV 560
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = -1
Query: 676 LXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIG 497
L G R ++R+ L K L+ TDVA RGIDI + +IN + +Y HRIG
Sbjct: 314 LHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTHRIG 373
Query: 496 RVGRAERMGLAISLVSTVPEKVWY 425
R GRA + G+A+S ++ V+Y
Sbjct: 374 RTGRAGKTGIAVSFLTQSDSGVFY 397
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 64.9 bits (151), Expect = 7e-11
Identities = 31/88 (35%), Positives = 50/88 (56%)
Frame = -1
Query: 697 NELSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKS 518
N +SC C G + +R + +E K+ + LI TD+ ARGID + ++N+ +P
Sbjct: 238 NAVSC-CTAGSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGE 296
Query: 517 NYVHRIGRVGRAERMGLAISLVSTVPEK 434
Y+HRIGR GR G+A++ V+ E+
Sbjct: 297 TYLHRIGRAGRFGTEGMAVTYVANGKEE 324
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 62.5 bits (145), Expect = 4e-10
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = -1
Query: 676 LXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIG 497
L GD K+R+ L+ F+ + + L+ TDVAARG+DI + ++ P + Y+HR G
Sbjct: 334 LHGDIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIHRSG 393
Query: 496 RVGRAERMGLAI 461
R GRA R G+ I
Sbjct: 394 RTGRAGREGICI 405
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = -1
Query: 682 VCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHR 503
+C+ K +ER + FKN + + L+ T++ RG+DI + + N +P++ Y+HR
Sbjct: 363 ICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 422
Query: 502 IGRVGRAERMGLAISLVS 449
+ R GR GLAI+ VS
Sbjct: 423 VARAGRFGTKGLAITFVS 440
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 60.9 bits (141), Expect = 1e-09
Identities = 32/81 (39%), Positives = 45/81 (55%)
Frame = -1
Query: 691 LSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNY 512
+ C + R N+ F++ + ++ TDVAARGIDI L +IN P + +
Sbjct: 500 IDCSYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLF 559
Query: 511 VHRIGRVGRAERMGLAISLVS 449
VHR+GRV RA R G A SLV+
Sbjct: 560 VHRVGRVARAGRSGTAYSLVA 580
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = -1
Query: 670 GDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRV 491
G+ + R + E F+N L+CTD+A+RG+D S + +IN P+ +Y+HR+GR
Sbjct: 728 GNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDYIHRVGRT 787
Query: 490 GRAERM 473
GR +
Sbjct: 788 GRVSHV 793
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = -1
Query: 688 SCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYV 509
SC + R F+ + L+C+D+ RGIDI + +IN P Y+
Sbjct: 317 SCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYL 376
Query: 508 HRIGRVGRAERMGLAISLVS 449
HRIGR GR +G+AI+L++
Sbjct: 377 HRIGRSGRFGHLGVAINLIT 396
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = -1
Query: 688 SCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYV 509
SC + R F+ + L+C+D+ RGIDI + +IN P Y+
Sbjct: 317 SCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYL 376
Query: 508 HRIGRVGRAERMGLAISLVS 449
HRIGR GR +G+AI+L++
Sbjct: 377 HRIGRSGRFGHLGVAINLIT 396
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = -1
Query: 661 KPKERKDNL-EIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGR 485
KP++ + L + F++ +V L+ TDVA+RG+D + +IN LPD Y+HR GR GR
Sbjct: 366 KPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIHRCGRTGR 425
Query: 484 AERMGLAISLVS 449
G+A S ++
Sbjct: 426 IGHHGIATSFLT 437
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/88 (31%), Positives = 50/88 (56%)
Frame = -1
Query: 694 ELSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSN 515
+L + + G +K ++R F N++ L+CTDVAARG+DI + +++ D+
Sbjct: 842 DLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKE 901
Query: 514 YVHRIGRVGRAERMGLAISLVSTVPEKV 431
Y+HR+GR R G +L+ +PE++
Sbjct: 902 YIHRVGRTARGTE-GKGHALLFLLPEEL 928
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = -1
Query: 628 FKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAERMGLAISLVS 449
FKN + + L+ T++ RG+DI + + N +P++ Y+HR+ R GR GLAI+ VS
Sbjct: 8 FKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVS 67
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Frame = -1
Query: 676 LXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEK------SN 515
L G+ ++R LE F+ + K LI T+V+ARGID+ + +IN +P +
Sbjct: 374 LSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFET 433
Query: 514 YVHRIGRVGRAERMGLAISLV 452
Y+HRIGR GR + G+A++ +
Sbjct: 434 YLHRIGRTGRFGKSGIAVNFI 454
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = -1
Query: 676 LXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHR 503
+ GD KER ++ F++ + LI TD+ ARGID+ + +IN LP + NY+HR
Sbjct: 360 MHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIHR 417
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = -1
Query: 736 DCDNLERYFKTFGNELSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGL 557
D D++ Y G E V + GD+ +ER + F L+ TDVA++G+D +
Sbjct: 99 DVDDIHEYLLLKGVE--AVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDI 156
Query: 556 PFMINITLPDEKSNYVHRIGRV 491
+IN +P++ NYV G++
Sbjct: 157 QHVINFDMPEDIENYVLLCGQL 178
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = -1
Query: 736 DCDNLERYFKTFGNELSCVCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGL 557
D D++ Y G E V + GD+ +ER + F L+ TDVA++G+D +
Sbjct: 99 DVDDIHEYLLLKGVE--AVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDI 156
Query: 556 PFMINITLPDEKSNYVHRIGRV 491
+IN +P++ NYV G++
Sbjct: 157 QHVINFDMPEDIENYVLLCGQL 178
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -1
Query: 676 LXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIG 497
+ DR +R + ++ F+ ++ LI T++ RGID G+ +IN P Y+HRIG
Sbjct: 413 IHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRIG 472
Query: 496 RV 491
V
Sbjct: 473 LV 474
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = -1
Query: 682 VCLXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHR 503
+ L G K K + F+ + L+CTDV ARG+DI + ++I P + +VHR
Sbjct: 119 MALHGKMKSNRHKI-FDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHR 177
Query: 502 IGRVGRAERMGLAI 461
GR R G A+
Sbjct: 178 CGRTARIGNEGNAV 191
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -1
Query: 580 RGIDISGLPFMINITLPDEKSNYVHRIGRVGRAERMGLAISLVS 449
RGIDI + +IN P Y+HRIGR GR +G+AI+L++
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT 48
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -1
Query: 580 RGIDISGLPFMINITLPDEKSNYVHRIGRVGRAERMGLAISLVS 449
RGIDI + +IN P Y+HRIGR GR +G+AI+L++
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT 48
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = -1
Query: 676 LXGDRKPKERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEK 521
L G+ +R + L+ FKN +V L+ TD+AARG+DI+G+ ++TL EK
Sbjct: 38 LHGNLTQLQRLEALQKFKNGEVDILVATDLAARGLDITGVKNSKSVTLVGEK 89
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -1
Query: 637 LEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAERMGLAIS 458
L F+ Q++ L+ T+ RG+D L + + +P Y+H GRVGR R G A +
Sbjct: 471 LRDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGRQGRPGTATT 530
Query: 457 LV 452
+V
Sbjct: 531 VV 532
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = -1
Query: 631 IFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAERMGLAISLV 452
I NS+++ ++ T G+DI + +I+ +P E +YV IGR GR R+ A
Sbjct: 306 IKSNSKIRVVVATCALGMGVDIPDVDHIIHFGIPSEVEHYVQEIGRGGRDGRLCYA---- 361
Query: 451 STVPEKVWYHGEWCSSRGRN 392
T+ K YH C S RN
Sbjct: 362 -TLYYKP-YHLAHCDSGMRN 379
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1
Query: 571 DISGLPFMINITLPDEKSNYVHRIGRVGRAERMG 470
DIS + F+IN P+ +YVHRIGR R++R G
Sbjct: 351 DISDIKFVINFDFPNCTEDYVHRIGRTARSDRTG 384
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -1
Query: 688 SCVCLXGDRKPKERKDNLEI-FKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNY 512
+C L G + KE K+ +E S I A+RG+DI + +I + + +
Sbjct: 74 ACAFLTGT-EIKEEKEVIEAQLPLSYNSRTIKDGFASRGLDIPNVTHVIQLDFATDAAQM 132
Query: 511 VHRIGRVGRAERMGLAISLVSTVPEKV 431
+HR+GR RA G ++ ++ E++
Sbjct: 133 LHRVGRTARAGSHGKVVNFITKDDEEL 159
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1
Query: 637 LEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGR 494
L++F+ Q+ L+ T V G+D+ F++ P +YV GR
Sbjct: 137 LKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYVQSKGR 184
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 550 MINITLPDEKSNYVHRIGRVGRAERMGLAISLVS 449
+IN +P YVH+IGR GR G +IS ++
Sbjct: 400 VINFDMPPTYEEYVHQIGRAGRLGATGWSISFIN 433
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -1
Query: 526 EKSNYVHRIGRVGRAERMGLAISLVS 449
EK +Y+HR+GR RA R G +++ V+
Sbjct: 125 EKEDYIHRVGRTARAGRSGRSVTFVT 150
>SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1725
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -1
Query: 298 NITIQQVETDMKVPSNEFDGKVVYGEKRKQAGSGYQDHVSQMAPVVKSLQELESQ 134
NITI+ + D K P GK V+ E+ ++ G +VS + V K L+ + S+
Sbjct: 303 NITIRDSQLDGKAPDKNESGKRVWYEEEEEEEEGEGGYVSTLGGVDKLLRAVRSK 357
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 577 GIDISGLPFMINITLPDEKSNYVHRIGRVGRAERM 473
G+DI + +I+ +P E +YV IGR GR R+
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYVQEIGRGGRDGRL 36
>SB_41473| Best HMM Match : Shugoshin_C (HMM E-Value=8.2)
Length = 144
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -1
Query: 340 YNEPQYLADIEDHLNITIQQVETDMKVPSNEFDGKV 233
+N+ + LAD+E H + ++ ++T+ +V EFD V
Sbjct: 81 HNQHETLADVEAHRHAHLRHIQTNKRVAREEFDRSV 116
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -1
Query: 652 ERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGR 485
+R+ + F + +++ + T G+D S + +I+ +P +YV IGR GR
Sbjct: 826 QRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESYVQEIGRAGR 881
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -1
Query: 619 SQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAERMGLAI 461
S+ + ++ T GID S + F+I+ + NY GR GR E+ I
Sbjct: 351 SRSQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEKRASCI 403
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -1
Query: 655 KERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAER 476
KE+ + + F+ L+ T V G+DI + ++ V R+GR GR +R
Sbjct: 567 KEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHASPIRLVQRMGRTGR-KR 625
Query: 475 MGLAISLVSTVPEKVWY 425
G + LV+ E+ Y
Sbjct: 626 DGRIVVLVAEGKEEQVY 642
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 655 KERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAER 476
+E++ +E FK V LI T VA G+DI F+I + + GR+ RA++
Sbjct: 985 QEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYDTYGNEISSTQARGRI-RADQ 1043
>SB_21899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 557 AVHDQHNASRRKVQLRTSHRARRSRGTHGPGHQSRLHRTRKGMV 426
A+H + A RRK RT ++GTHG ++ R R V
Sbjct: 200 AMHGRRGAYRRKRHARTQGARTNAKGTHGRRGHAQTQRARTDAV 243
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 298 NITIQQVETDMKVP-SNEFDGKVVYGEKRKQAGSGYQDHVS 179
NITI+ + D K P NE +V Y E+ ++ G G +VS
Sbjct: 234 NITIRDSQLDGKTPDKNESGKRVWYEEEEEEEGEGEGGYVS 274
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 545 QHNASRRKVQLRTS-HRARRSRGTHGPGHQSRLHRTRKGMVSWRV 414
+H +R +++L + HR R H H HRTR G+ R+
Sbjct: 1205 RHGLARHRIRLGLARHRIRHGLARHRIRHGLARHRTRHGLARHRI 1249
>SB_58701| Best HMM Match : bZIP_2 (HMM E-Value=1.6)
Length = 940
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 548 DQHNASRRKVQLRTSHRARRSRGTHGPGHQSRLHRTRK 435
++ RR+ Q+R + R RR+R G Q+RL R ++
Sbjct: 871 EELRVERRRTQMREAQRRRRARLRAGETEQARLGRLQR 908
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 524 KVQLRTSHRARRSRGTHGPGHQSRLH 447
K Q+ + HRA+R+ +H GH+ ++H
Sbjct: 995 KGQVHSIHRAQRASSSHPTGHKGQVH 1020
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -1
Query: 652 ERKDNLEIFKNSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRAERM 473
E+ + ++ F++ +FLI T+ G + + ++ P +++V GR GRA
Sbjct: 1081 EKIEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLTSWVQEFGRGGRAGNN 1140
Query: 472 GLAI 461
AI
Sbjct: 1141 AKAI 1144
>SB_50861| Best HMM Match : Borrelia_orfA (HMM E-Value=4.4)
Length = 373
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 625 KNSQVKFLI-CTDVAARG-IDISGLPFMINITLPDEKSN 515
+NS+ + +I C D+ G +DI G PF++ + P N
Sbjct: 304 RNSETQLIITCHDLVVYGTVDIEGEPFLVPMDRPSRNGN 342
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 670 GDRKPKERKDNLEIFK-NSQVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGR 494
G +E+++ + F+ S+ +I T VA G+DI ++I + + + V GR
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGNEISSVQSRGR 656
Query: 493 V 491
V
Sbjct: 657 V 657
>SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)
Length = 1058
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 298 NITIQQVETDMKVPSNEFDGKVVYGEKRKQAGSGYQD 188
NI I+ + D K P+ GK V+ E+ ++ G G D
Sbjct: 32 NINIRDSQLDGKAPNENESGKRVWYEEGEEEGEGSND 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,183,892
Number of Sequences: 59808
Number of extensions: 514011
Number of successful extensions: 1528
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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