Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_L02
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    25   0.79 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   1.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.8  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   2.4  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           23   4.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.2  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   5.6  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   7.4  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   7.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   7.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.8  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 564 NGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCV 421
           NG C+ +C  A    + S    C C DG +L   D  +C+   S   V
Sbjct: 40  NGHCSHLCLPAPRINSKSPLLSCACPDGLKLL-SDGLMCVEKVSTTIV 86


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 564 NGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCL 445
           NG C+ +C  A    + S    C C DG +L   D  +C+
Sbjct: 40  NGHCSHLCLPAPRINSKSPLLSCACPDGLKLL-SDGLMCV 78


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 22/79 (27%), Positives = 33/79 (41%)
 Frame = -2

Query: 693 GLCTCDSGYKNIDDVCVPQCLDCRNGECVAPNDCLCHDNYAMSNGTCAPVCRRACTNGAC 514
           G C C  GY+   DV   +C +C  G+         H+  + S   C P   ++   G  
Sbjct: 245 GGCHCKPGYQA--DVEKQECTECPIGK-------FKHEAGSHSCEAC-PAHSKSSDYGFT 294

Query: 513 SEPDKCTCDDGYRLSPEDP 457
               +C CD GY  + +DP
Sbjct: 295 ----ECRCDPGYFRAEKDP 309


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 240 NNTACSANCSAGGEECGLGS--GCPSEQTHF 154
           N++AC+ANC + G+  G     GC   +T F
Sbjct: 56  NDSACAANCLSLGKAGGHCEKVGCICRKTSF 86


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 240 NNTACSANCSAGGEECG 190
           N++AC+ANC + G+  G
Sbjct: 31  NDSACAANCHSLGKAGG 47


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = -2

Query: 669 YKNIDDVCVPQCLDCRNGECVAPNDCLCHD 580
           Y+  D   V QC+ CR G         C D
Sbjct: 615 YQIRDHKDVTQCISCRQGTVPDETHSACRD 644


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 240 NNTACSANCSAGGEECG 190
           N++AC+ANC + G+  G
Sbjct: 56  NDSACAANCLSLGKAGG 72


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 369 RNDTNSNVCYKKCDGACE 316
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 369 RNDTNSNVCYKKCDGACE 316
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +2

Query: 704 HVPLTQRSHRGEHSTGXXVXXVGAHGG 784
           H       HRG H T   V  V A  G
Sbjct: 203 HAAFISMRHRGAHITDIVVLVVAADDG 229


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 327 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 220
           G+C  G       C+   G + SN   IR  T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 327 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 220
           G+C  G       C+   G + SN   IR  T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 327 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 220
           G+C  G       C+   G + SN   IR  T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,960
Number of Sequences: 438
Number of extensions: 4447
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)