Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N18
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.58
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 28 1.8
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 28 1.8
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 28 1.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.8
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 26 5.5
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.5
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 5.5
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 26 7.2
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.5
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.5
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 25 9.5
SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual 25 9.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 25 9.5
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.58
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -1
Query: 702 PSPAISXTSTRSSN---PRFHTPTTPDLTSIS-INPLTPY*KEFAPGLKP 565
P P+IS T+T SS H PTTPD ++ + L P +P KP
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKP 322
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 708 KPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY 595
+PPS A+ + + P P P + + NP TP+
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF 282
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 654 FHTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPLIFK* 478
FHTPT P T +S +P + + PLS +A S LT S L + PL
Sbjct: 139 FHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS--LTSSPLKDFQSSPPLSTVL 196
Query: 477 MMNHKLRALLV 445
+H L +L+
Sbjct: 197 QKSHSLHDILL 207
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -1
Query: 531 TPSSLGMXKGVSPLIFK*MMNHKLRALLVVIPRILRSPPPTHPL 400
+P+++ + K V+ IF + H R L V+P++LRS +H L
Sbjct: 738 SPNNVILLKLVTSEIFIRSIKHVFRNFLAVVPQVLRSHLLSHLL 781
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -1
Query: 705 PPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 544
PP PA + ++ SS+P T +T TS SI P P + PP SS P
Sbjct: 370 PPPPASTSSTGTSSSPLLST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSSSTP 421
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 732 LAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSIS 616
LA S S IS +ST N FH PT TS S
Sbjct: 790 LATSLYLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSS 828
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.8
Identities = 34/185 (18%), Positives = 69/185 (37%), Gaps = 2/185 (1%)
Frame = -1
Query: 699 SPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP-S 523
S + TST ++ +TP +S ++N TP P++S TP +
Sbjct: 1562 SSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT 1621
Query: 522 SLGMXKGVSPLIFK*MMNHKLRALLVVIPRILRSPPPT-HPLIEDVVMATNQAIIDYKVK 346
S + +P+ ++N + + SPP T ++ T+ +++
Sbjct: 1622 SSSVLNSSTPITSSTVLNSS--TPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTP 1679
Query: 345 IADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSA 166
I + +V + + S+ + T + S S+ P + N T + + S
Sbjct: 1680 ITSSTVV-NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSST 1738
Query: 165 SIQAS 151
I +S
Sbjct: 1739 PITSS 1743
Score = 25.8 bits (54), Expect = 7.2
Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 1/184 (0%)
Frame = -1
Query: 699 SPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP-S 523
S + TST ++ +TP +S ++N TP P++S TP +
Sbjct: 890 SSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTGLNTSTPIT 949
Query: 522 SLGMXKGVSPLIFK*MMNHKLRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKI 343
S + +P+ ++N + +P + ++ T+ ++++ I
Sbjct: 950 SSSVLNSSTPITSSTVLNSS-TPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTPI 1008
Query: 342 ADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSAS 163
++ V + A+ S+ + T + S S+ P + N T + + S
Sbjct: 1009 TSSS-VLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTP 1067
Query: 162 IQAS 151
I +S
Sbjct: 1068 ITSS 1071
Score = 25.8 bits (54), Expect = 7.2
Identities = 33/186 (17%), Positives = 69/186 (37%), Gaps = 3/186 (1%)
Frame = -1
Query: 699 SPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP-S 523
S + TST ++ +TP +S +N TP P++S TP +
Sbjct: 2258 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 2317
Query: 522 SLGMXKGVSPLIFK*MMNHKLRALLVVIPRILRSPPP--THPLIEDVVMATNQAIIDYKV 349
S + +P+ ++N + + +L S P + ++ T+ ++
Sbjct: 2318 SSSVLNSSTPITSSTVVN---TSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTST 2374
Query: 348 KIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLS 169
I ++ V + + S+++ T + S S+ P + N T + + S
Sbjct: 2375 SITSSS-VLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTSITSSSVLNSS 2433
Query: 168 ASIQAS 151
I +S
Sbjct: 2434 TPITSS 2439
Score = 25.4 bits (53), Expect = 9.5
Identities = 32/184 (17%), Positives = 68/184 (36%), Gaps = 1/184 (0%)
Frame = -1
Query: 699 SPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP-S 523
S + TST ++ +TP +S +N TP P++S + TP +
Sbjct: 2198 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPIT 2257
Query: 522 SLGMXKGVSPLIFK*MMNHKLRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKI 343
S + +P+ ++N + +P + ++ T+ ++ I
Sbjct: 2258 SSTVVNTSTPITSSTVVNSSTPITSSTVVN-TSTPITSSTVVNSSTPITSSTALNTSTPI 2316
Query: 342 ADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSAS 163
++ V + + S+++ T + S S+ P + N T + + S S
Sbjct: 2317 TSSS-VLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTS 2375
Query: 162 IQAS 151
I +S
Sbjct: 2376 ITSS 2379
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 255 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 160
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -1
Query: 693 AISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLG 514
A+ T T S+NP T I N + K F+ PP++++ P +L P+S
Sbjct: 683 ALPATVTTSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQA--PPIATKKPPTFLKPNSPE 740
Query: 513 MXKGVSP 493
K V P
Sbjct: 741 YAKTVIP 747
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -1
Query: 354 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 175
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 174 LSASIQASLPSSEIYRQL 121
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 5.5
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = -1
Query: 699 SPAISXTSTRSS-NPRFHTPTTPDLTSISINPLTP-----Y*KEFAPGLKPPLSSEAPSA 538
SP +S S +P P+TP + SI+P TP Y + A L PLS + +A
Sbjct: 284 SPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTA 343
Query: 537 YL 532
YL
Sbjct: 344 YL 345
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 465 KLRALLVVIPRILRSPPPTHPLIEDV 388
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 5.5
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -1
Query: 708 KPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 529
+PPSP I R+S F +PT S+ + + G+ P SS A A+L+
Sbjct: 494 RPPSPGIVTPPQRTSPSFFVSPTESTRQSLDSRRSFEHSTSSSSGISPSHSS-ASLAHLS 552
Query: 528 PSS 520
+S
Sbjct: 553 QAS 555
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 693 AISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS 520
A+ ++ S F PTT S+SI+P K A +P + ++ S TP++
Sbjct: 69 AVETNASASHETSFALPTTSPAASLSISPT----KSAAVSSEPNVEADVKSLSSTPAA 122
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 330 LVTHKELALKVSSIIGTRVYVFDPSCY 250
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 470 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 384
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 711 IKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG--LKPPLSSEAPSA 538
I+ S + TS S++ ++ +TP+ S + LTP + L+ PL +PSA
Sbjct: 294 IRSHSTNTTITSVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSA 353
>SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 132 YRQLVDPRHVSSDSFGXYVKX*SLXLHSFGLLV 34
YRQLVD R ++ D F + K LH + V
Sbjct: 34 YRQLVDGRELTLDDFISHAKALRTHLHRLDINV 66
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.4 bits (53), Expect = 9.5
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = -1
Query: 729 AVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 550
A SP PP A + TS SS P ++ NP AP +P
Sbjct: 398 AASPQAGHPPPWAAASTSVSSSTSSPAPWAKPASSAAPSNP--------APWQQPAAPQS 449
Query: 549 APSAYLTPSSL 517
AP+ + PSSL
Sbjct: 450 APALSMNPSSL 460
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,808,267
Number of Sequences: 5004
Number of extensions: 53814
Number of successful extensions: 210
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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