Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M24
         (887 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RN76 Cluster: Predicted protein; n=1; Nematostella ve...    34   5.6  

>UniRef50_A7RN76 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 337

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 607 PRHTRWRPARCSPWCSXFCXPRXPAXRHWTXIXC 506
           PRH +W   RC   C+ +  PR P+ + W    C
Sbjct: 251 PRHFQWDQIRCKCVCNPYHIPRCPSRQEWHSDVC 284


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,629,305
Number of Sequences: 1657284
Number of extensions: 5712103
Number of successful extensions: 14616
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 14298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14608
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)