Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_D24
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 296 1e-80
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.1
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.1
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 29 5.1
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 29 5.1
AF016416-8|AAB65271.1| 388|Caenorhabditis elegans Hypothetical ... 28 6.7
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 296 bits (726), Expect = 1e-80
Identities = 134/212 (63%), Positives = 158/212 (74%)
Frame = -3
Query: 759 DILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICF 580
D++WNTAVVIS TG VIG+ RKNHIPRVGDFNES YYME GHPVF T+YG+I +NIC+
Sbjct: 177 DVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICY 236
Query: 579 GRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYE 400
GRHH NWMM+ NGAEI+FNPSAT+ SE +W +EARNAAI N FT INRVG E
Sbjct: 237 GRHHPQNWMMYALNGAEIIFNPSATVGAL--SEPLWGIEARNAAIANHVFTVGINRVGTE 294
Query: 399 EFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRD 220
FPNEFTS +G+PAHKD G FYGSSY PDG R P LSR R+G+LIA +DLNL RQ +D
Sbjct: 295 VFPNEFTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCKD 354
Query: 219 RRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 124
+ MT RLDMY +++V DY+P + E
Sbjct: 355 AWGFRMTNRLDMYAQKITEVSNPDYRPDIRRE 386
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +1
Query: 460 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPSEADVHRDLAVSGREYRMAGV 639
SFNV + + G++R + + ++ + +H +QD+ P+ + RD + ++AG+
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPTPF-MSRDELIDNSVRKLAGM 79
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 174 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 281
C++TC G S CL S CSG S R ++ ++ C
Sbjct: 35 CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 558 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 394
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 558 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 394
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 558 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 394
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 558 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 394
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF016416-8|AAB65271.1| 388|Caenorhabditis elegans Hypothetical
protein F29A7.1 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -3
Query: 750 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 646
WN + + D ++ + H+ R GD+ NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,476,166
Number of Sequences: 27780
Number of extensions: 373291
Number of successful extensions: 1132
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -