Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_D21
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    27   0.55 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    27   0.55 
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    26   1.3  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.5 bits (58), Expect = 0.55
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -1

Query: 142 LPRVPGSKSSRPRALGSASNSRR 74
           +P +P + S  PRA GS+SNSRR
Sbjct: 59  VPTLP-TTSGEPRAAGSSSNSRR 80


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.5 bits (58), Expect = 0.55
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -1

Query: 142 LPRVPGSKSSRPRALGSASNSRR 74
           +P +P + S  PRA GS+SNSRR
Sbjct: 59  VPTLP-TTSGEPRAAGSSSNSRR 80


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
 Frame = -2

Query: 489 RKSILTPLESSKWM-MGAKVVKKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPNADL 313
           +K ++ P     W  + A  + K  QS +     T G+++             L   ADL
Sbjct: 18  KKKVVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSL---ADL 74

Query: 312 SKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQGMSTTATDQYDM-SKQQT 163
              PD ER   K++  A     G  RDV+    GM+ T      M +K QT
Sbjct: 75  QNEPDAERSFRKFKLVA-ESVNG--RDVLTNFHGMALTTDKLRSMVNKWQT 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,043
Number of Sequences: 2352
Number of extensions: 10846
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)