Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_D19
(783 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43940.1 68418.m05376 alcohol dehydrogenase class III / gluta... 236 1e-62
At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical t... 162 2e-40
At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar... 152 2e-37
At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar... 152 2e-37
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar... 142 2e-34
At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar... 142 3e-34
At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar... 140 7e-34
At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar... 139 2e-33
At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar... 135 4e-32
At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar... 132 2e-31
At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar... 132 2e-31
At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative / L-id... 39 0.004
At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative / L-id... 39 0.004
At2g26860.2 68415.m03223 F-box family protein contains F-box dom... 29 2.6
At2g26860.1 68415.m03222 F-box family protein contains F-box dom... 29 2.6
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen... 29 4.6
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen... 29 4.6
At3g02060.1 68416.m00169 DEAD/DEAH box helicase, putative simila... 28 6.1
At4g19050.1 68417.m02806 mob1/phocein family protein contains Pf... 28 8.0
>At5g43940.1 68418.m05376 alcohol dehydrogenase class III /
glutathione-dependent formaldehyde dehydrogenase /
GSH-FDH (ADHIII) identical to gi:1143388
Length = 379
Score = 236 bits (578), Expect = 1e-62
Identities = 112/201 (55%), Positives = 137/201 (68%)
Frame = -3
Query: 769 GXGVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVA 590
G GVPTG G V G K AG +RIIG+DI+ K+E A
Sbjct: 176 GCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETA 235
Query: 589 KKFGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXX 410
KKFGVNEFVNPKD+DKPIQ+V+VDLTDGG++Y+FECIGNV MRAALE CHK
Sbjct: 236 KKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295
Query: 409 XXXXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPL 230
G+EISTRPFQLVTGR WKGTAFGG+KSR VP LV++Y+ K++ +DE++THN+ L
Sbjct: 296 GVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTL 355
Query: 229 KEINEAFHLMHAGKSIRAVVD 167
EIN+AF L+H G +R V+D
Sbjct: 356 GEINKAFDLLHEGTCLRCVLD 376
>At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical to
alcohol dehydrogenase GI:469467 from (Arabidopsis
thaliana)
Length = 379
Score = 162 bits (394), Expect = 2e-40
Identities = 74/165 (44%), Positives = 103/165 (62%)
Frame = -3
Query: 658 GCKAAGXNRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECI 479
G + AG +RIIGVD N +F+ AK+FGV E VNPKD+DKPIQQV+ ++TDGG++ + EC
Sbjct: 213 GARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECT 272
Query: 478 GNVGTMRAALEACHKXXXXXXXXXXXXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVP 299
G+V M A E H + T P + RT KGT FG YK + +P
Sbjct: 273 GSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIP 332
Query: 298 KLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRAVVDM 164
+V++Y+ K+L L++F+TH VP EIN+AF M G+SIR ++ M
Sbjct: 333 GVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESIRCIITM 377
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 746 GARLDTAXXEPGSNCAIFGXGAVGL 672
GA L+ A + G + AIFG GAVGL
Sbjct: 184 GATLNVAKPKKGQSVAIFGLGAVGL 208
>At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 352
Score = 152 bits (369), Expect = 2e-37
Identities = 74/200 (37%), Positives = 109/200 (54%)
Frame = -3
Query: 763 GVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKK 584
GV G G A + V + G K G +I+GVDINP K E AK
Sbjct: 151 GVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKT 210
Query: 583 FGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXXX 404
FGV +F+N D +PI QV+ +T GG +++FEC+G+ G AL++C
Sbjct: 211 FGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGV 270
Query: 403 XXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKE 224
E+S ++G++ KGT FGG+K + +P L+D+Y+ K++ +DEF+THN+ E
Sbjct: 271 PKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDE 330
Query: 223 INEAFHLMHAGKSIRAVVDM 164
IN+AF LM GK +R V+ M
Sbjct: 331 INKAFVLMREGKCLRCVLHM 350
>At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 381
Score = 152 bits (369), Expect = 2e-37
Identities = 74/200 (37%), Positives = 109/200 (54%)
Frame = -3
Query: 763 GVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKK 584
GV G G A + V + G K G +I+GVDINP K E AK
Sbjct: 180 GVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKT 239
Query: 583 FGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXXX 404
FGV +F+N D +PI QV+ +T GG +++FEC+G+ G AL++C
Sbjct: 240 FGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGV 299
Query: 403 XXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKE 224
E+S ++G++ KGT FGG+K + +P L+D+Y+ K++ +DEF+THN+ E
Sbjct: 300 PKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDE 359
Query: 223 INEAFHLMHAGKSIRAVVDM 164
IN+AF LM GK +R V+ M
Sbjct: 360 INKAFVLMREGKCLRCVLHM 379
>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GB:CAA37333 GI:297178 from
[Solanum tuberosum]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 394
Score = 142 bits (344), Expect = 2e-34
Identities = 67/200 (33%), Positives = 105/200 (52%)
Frame = -3
Query: 763 GVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKK 584
GV TG G A + V + G +A G +RIIGVD N KFE K
Sbjct: 189 GVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFEKGKL 248
Query: 583 FGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXXX 404
GV +F+NPKD KP+ Q++ ++T GG++Y+FEC GNV +R A + H
Sbjct: 249 MGVTDFINPKDLTKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTVLVGI 308
Query: 403 XXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKE 224
+ P +L GR G+ FGG+K + +P + ++ + L+ F+T+ +P ++
Sbjct: 309 YPTPRTLPLHPMELFDGRRITGSVFGGFKPKSQLPNFAQQCMKGVVKLEPFITNELPFEK 368
Query: 223 INEAFHLMHAGKSIRAVVDM 164
IN+AF L+ GKS+R ++ +
Sbjct: 369 INDAFQLLRDGKSLRCILQI 388
>At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GI:551257 from [Nicotiana tabacum]
Length = 396
Score = 142 bits (343), Expect = 3e-34
Identities = 63/200 (31%), Positives = 112/200 (56%)
Frame = -3
Query: 763 GVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKK 584
GV TG G A + + G +A G ++IIG+DINPDKF++ ++
Sbjct: 197 GVSTGVGAAWNVADIQPASTVAIFGLGAVGLAVAEGARARGASKIIGIDINPDKFQLGRE 256
Query: 583 FGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXXX 404
G++EF+NPK+ DK + + ++++T+GG+EY+FEC G++ +R A + +
Sbjct: 257 AGISEFINPKESDKAVHERVMEITEGGVEYSFECAGSIEALREAFLSTNSGVGVTVMLGV 316
Query: 403 XXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKE 224
+ + P +L GR+ + FGG+K + +P + + L+ L LD F++H +P +
Sbjct: 317 HASPQLLPIHPMELFQGRSITASVFGGFKPKTQLPFFITQCLQGLLNLDLFISHQLPFHD 376
Query: 223 INEAFHLMHAGKSIRAVVDM 164
INEA L+H GK++R ++ +
Sbjct: 377 INEAMQLLHQGKALRCLLHL 396
>At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 388
Score = 140 bits (340), Expect = 7e-34
Identities = 74/201 (36%), Positives = 107/201 (53%), Gaps = 1/201 (0%)
Frame = -3
Query: 763 GVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKK 584
GV TG G A + V + G + G +IIG+D N DKFE+ KK
Sbjct: 186 GVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKK 245
Query: 583 FGVNEFVNPKDY-DKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXX 407
FG +F+NP +K I +V+ ++T+GG++Y+FEC+G + A +
Sbjct: 246 FGFTDFINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTGKTVMLG 305
Query: 406 XXXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLK 227
IS F L+ GR G+ FGG KS+ +P LVD YL+K+L LD F+TH + K
Sbjct: 306 MEKHAAPISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFK 365
Query: 226 EINEAFHLMHAGKSIRAVVDM 164
EIN+AF L+ GKS+R ++ M
Sbjct: 366 EINKAFALLEEGKSLRCILWM 386
>At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 386
Score = 139 bits (337), Expect = 2e-33
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Frame = -3
Query: 760 VPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKKF 581
V TG G A + V + G + G +IIGVD+NP KFE+ K+F
Sbjct: 185 VATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRF 244
Query: 580 GVNEFVNPKDY-DKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXXX 404
G+ +FVNP +K I +V+ ++TD G +Y+FECIG M A ++
Sbjct: 245 GITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGM 304
Query: 403 XXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKE 224
IS + L+ GRT GT FGG K + +P LVD YL+K+L L++ +TH + +E
Sbjct: 305 EQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEE 364
Query: 223 INEAFHLMHAGKSIRAVVDM 164
IN+AFHL+ G SIR ++ M
Sbjct: 365 INKAFHLLAEGNSIRCIIWM 384
>At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 390
Score = 135 bits (326), Expect = 4e-32
Identities = 74/202 (36%), Positives = 107/202 (52%), Gaps = 2/202 (0%)
Frame = -3
Query: 763 GVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKK 584
GV TG G A V + G + G +RIIGVDINP KF+V +K
Sbjct: 188 GVSTGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQK 247
Query: 583 FGVNEFVNPKDYDKP-IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXX 407
FGV EFVN +K + +V+ ++TDGG +Y FEC+G+ ++ A C +
Sbjct: 248 FGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLG 307
Query: 406 XXXXGEEISTRPFQLVT-GRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPL 230
G +I F ++ G+ G+ FGG K++ +P L+ YL +L LD+FVTH +
Sbjct: 308 VDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKF 367
Query: 229 KEINEAFHLMHAGKSIRAVVDM 164
+EIN+AF L+ GK IR V+ M
Sbjct: 368 EEINDAFQLLLEGKCIRCVLWM 389
>At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 132 bits (320), Expect = 2e-31
Identities = 70/201 (34%), Positives = 105/201 (52%), Gaps = 1/201 (0%)
Frame = -3
Query: 763 GVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKK 584
GV TG G A + V + G + G +IIGVD+NP+KFE+ KK
Sbjct: 187 GVSTGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKK 246
Query: 583 FGVNEFVNPKDY-DKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXX 407
FG +F+N + I +V+ ++T GG++Y+FEC+G + A +
Sbjct: 247 FGFTDFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLG 306
Query: 406 XXXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLK 227
+S F L+ GR G+ FGG K + +P LVD YL+K+L LD F+TH + +
Sbjct: 307 IDKHLTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFE 366
Query: 226 EINEAFHLMHAGKSIRAVVDM 164
EIN+AF L+ GKS+R ++ M
Sbjct: 367 EINKAFDLLVQGKSLRCILWM 387
>At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 132 bits (320), Expect = 2e-31
Identities = 70/201 (34%), Positives = 105/201 (52%), Gaps = 1/201 (0%)
Frame = -3
Query: 763 GVPTGKGPAXILPXVNQDXIXXXXXXXXXXXXXXLGCKAAGXNRIIGVDINPDKFEVAKK 584
GV TG G A + V + G + G +IIGVD+NP+KFE+ KK
Sbjct: 187 GVSTGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKK 246
Query: 583 FGVNEFVNPKDY-DKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKXXXXXXXXX 407
FG +F+N + I +V+ ++T GG++Y+FEC+G + A +
Sbjct: 247 FGFTDFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLG 306
Query: 406 XXXXGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLK 227
+S F L+ GR G+ FGG K + +P LVD YL+K+L LD F+TH + +
Sbjct: 307 IDKHLTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFE 366
Query: 226 EINEAFHLMHAGKSIRAVVDM 164
EIN+AF L+ GKS+R ++ M
Sbjct: 367 EINKAFDLLVQGKSLRCILWM 387
>At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 38.7 bits (86), Expect = 0.004
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 6/162 (3%)
Frame = -3
Query: 652 KAAGXNRIIGVDINPDKFEVAKKFGVNEFV----NPKDYDKPIQQVLVDLTDGGLEYTFE 485
+A RI+ VD++ ++ VAK+ G +E V N +D ++Q+ + ++ TF+
Sbjct: 202 RAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDVGSEVEQIQKAM-GSNIDVTFD 260
Query: 484 CIGNVGTMRAALEACHKXXXXXXXXXXXXXGEEISTRPFQLVTGRTWKGTAFGGYKSRES 305
C G TM AL A G I T P R + G ++ + +
Sbjct: 261 CAGFNKTMSTALAATR----CGGKVCLVGMGHGIMTVPLTPAAAR--EVDVVGVFRYKNT 314
Query: 304 VPKLVDEYLEKKLPLDEFVTHNVPL--KEINEAFHLMHAGKS 185
P ++ K+ + +TH KE+ +AF G +
Sbjct: 315 WPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSN 356
>At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 38.7 bits (86), Expect = 0.004
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 6/162 (3%)
Frame = -3
Query: 652 KAAGXNRIIGVDINPDKFEVAKKFGVNEFV----NPKDYDKPIQQVLVDLTDGGLEYTFE 485
+A RI+ VD++ ++ VAK+ G +E V N +D ++Q+ + ++ TF+
Sbjct: 202 RAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDVGSEVEQIQKAM-GSNIDVTFD 260
Query: 484 CIGNVGTMRAALEACHKXXXXXXXXXXXXXGEEISTRPFQLVTGRTWKGTAFGGYKSRES 305
C G TM AL A G I T P R + G ++ + +
Sbjct: 261 CAGFNKTMSTALAATR----CGGKVCLVGMGHGIMTVPLTPAAAR--EVDVVGVFRYKNT 314
Query: 304 VPKLVDEYLEKKLPLDEFVTHNVPL--KEINEAFHLMHAGKS 185
P ++ K+ + +TH KE+ +AF G +
Sbjct: 315 WPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSN 356
>At2g26860.2 68415.m03223 F-box family protein contains F-box domain
Pfam:PF00646
Length = 355
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -3
Query: 304 VPKL--VDEYLEKKLPLDEFVTHNVPL--KEINEAFHLMHAGKSIR 179
VPKL V + E LP+ +F+T N+ L ++ E+FHL S +
Sbjct: 41 VPKLTFVMNHYESDLPIQDFITKNLRLLKPQVIESFHLQCFSSSFK 86
>At2g26860.1 68415.m03222 F-box family protein contains F-box domain
Pfam:PF00646
Length = 405
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -3
Query: 304 VPKL--VDEYLEKKLPLDEFVTHNVPL--KEINEAFHLMHAGKSIR 179
VPKL V + E LP+ +F+T N+ L ++ E+FHL S +
Sbjct: 41 VPKLTFVMNHYESDLPIQDFITKNLRLLKPQVIESFHLQCFSSSFK 86
>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 746 GARLDTAXXEPGSNCAIFGXGAVGLSC 666
GA A PG + A+ G G VG SC
Sbjct: 235 GAMAHAAEIRPGDSIAVIGIGGVGSSC 261
>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 746 GARLDTAXXEPGSNCAIFGXGAVGLSC 666
GA A PG + A+ G G VG SC
Sbjct: 235 GAMAHAAEIRPGDSIAVIGIGGVGSSC 261
>At3g02060.1 68416.m00169 DEAD/DEAH box helicase, putative similar
to C-terminal half of transcription-repair coupling
factor (TRCF) GB:Q55750 [Synechocystis PCC6803];
contains Pfam profile: helicases conserved C-terminal
domain
Length = 823
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Frame = -3
Query: 658 GCKAAGXN----RIIGVDINPDKFEVAKKFGVNEFVN-----PKDYDKPIQQVLVDLTDG 506
G KAAG ++ + + V KK G+ FV PKD +P++ V ++ DG
Sbjct: 124 GTKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADG 183
>At4g19050.1 68417.m02806 mob1/phocein family protein contains Pfam
PF03637: Mob1/phocein family; contains Pfam F00560:
Leucine Rich Repeats; contains TIGRFAMS profile
TIGR01612: reticulocyte binding protein; hypothetical
protein YIL106w, Saccharomyces cerevisiae, PIR2:S48466
Length = 1405
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 404 SCCWRRDQHSSIPTCYRSHLEGNSF 330
S C RDQ S I C S EG+SF
Sbjct: 907 SSCIERDQWSQIKECLTSKSEGSSF 931
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,964,365
Number of Sequences: 28952
Number of extensions: 304377
Number of successful extensions: 861
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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