Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_D13
(776 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 128 2e-28
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 44 0.004
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 43 0.007
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 37 0.65
UniRef50_Q03R86 Cluster: Predicted outer membrane protein; n=1; ... 36 1.1
UniRef50_UPI0000E249B2 Cluster: PREDICTED: hypothetical protein;... 35 2.0
UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|R... 35 2.6
UniRef50_A4BLY4 Cluster: TonB-like protein; n=1; Nitrococcus mob... 34 3.4
UniRef50_A7RPE6 Cluster: Predicted protein; n=2; Nematostella ve... 34 3.4
UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing... 34 4.6
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 34 4.6
UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus elo... 33 8.0
UniRef50_Q0V1A0 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 128 bits (309), Expect = 2e-28
Identities = 59/63 (93%), Positives = 59/63 (93%)
Frame = -3
Query: 696 PXDXGYINPIIKSPIPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 517
P D GYINPIIKSPIPYTNHPRLNIHFHQS DAV EGVRAGVKASVVIRGSISVSHPLVT
Sbjct: 175 PCDLGYINPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVKASVVIRGSISVSHPLVT 234
Query: 516 GHG 508
GHG
Sbjct: 235 GHG 237
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -3
Query: 696 PXDXGYINPIIKSPIPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPL 523
P + +NP IK + YT+ PRL F+++ V G A + S++IRG I S P+
Sbjct: 166 PAELSSLNPTIKDSVTYTDCPRLTCGFYRNDACVALGSSAPICGSILIRGVIECSAPI 223
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 696 PXDXGYINPIIKSPIPYTNHPRLNIHFHQSPDAVXEGVRAGV-KASVVIRGSISVS 532
P D NP++K + Y N P+L + FH++ DA V V S+VIRG + S
Sbjct: 170 PADLRSTNPVVKDTVSYNNTPKLTVAFHKNTDAPAVSVTTPVIYGSIVIRGVVRCS 225
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 36.7 bits (81), Expect = 0.65
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = -3
Query: 702 HXPXDXGYINPIIKSPIPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHP 526
H P D +NP++K P+ YT+ PR + + + G + ++++RG + +S P
Sbjct: 2130 HLPADLTRLNPVLKGPVKYTDCPRFSYSVYSN-----GGTKGTNLCTIILRGVVRLSGP 2183
>UniRef50_Q03R86 Cluster: Predicted outer membrane protein; n=1;
Lactobacillus brevis ATCC 367|Rep: Predicted outer
membrane protein - Lactobacillus brevis (strain ATCC 367
/ JCM 1170)
Length = 619
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Frame = -1
Query: 701 TXPXXXXTSTRSSNPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPS 522
T P T NP TPT P NP P PG PP E P + P+
Sbjct: 404 TEPENPTNPTEPGNPGTTTPTEPTEPGTPTNPTEPS----NPGTTPPTKPENPGTTVPPT 459
Query: 521 SLGM----XKGVSPP 489
G+ GV+PP
Sbjct: 460 KPGVTPPTKPGVTPP 474
>UniRef50_UPI0000E249B2 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 340
Score = 35.1 bits (77), Expect = 2.0
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -1
Query: 695 PXXXXTSTRSSNPRFHTPTTPDLTSISINPLTP-X*KEFAPGLKPPLSSEAPSAYLTPSS 519
P T TRSS P +TP LT S LTP P P L+ + + L PSS
Sbjct: 148 PSSTPTLTRSSTPTLIPSSTPTLTPSSRPTLTPSSTPTLTPSSTPTLTPSSTTPTLNPSS 207
Query: 518 LGMXKGVSPP 489
L + S P
Sbjct: 208 LPILTPSSTP 217
>UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|Rep:
OmpA/MotB precursor - Nitrobacter hamburgensis (strain
X14 / DSM 10229)
Length = 673
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -1
Query: 659 PRFHTPTTPDLTSIS--INPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPP 489
P TP PD+T S P TP +P PP + AP+A P+ K +PP
Sbjct: 242 PGSTTPAAPDVTPTSPRATPATPSAPVASPAATPPSGAAAPAAATPPTGPAGTKAGTPP 300
>UniRef50_A4BLY4 Cluster: TonB-like protein; n=1; Nitrococcus
mobilis Nb-231|Rep: TonB-like protein - Nitrococcus
mobilis Nb-231
Length = 307
Score = 34.3 bits (75), Expect = 3.4
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = -1
Query: 671 RSSNPRFHTPTTPDLTSISINPLTPX*KEFAPG-LKPPLSS----EAPSAYLTPSSLGMX 507
R S PR HTP P+ + PL P LKPP S+ + +A L PS+ G
Sbjct: 129 RESTPREHTPKPPEPPQPKLQPLKAAESARPPAPLKPPTSTHNSVDERTAALAPSAKGAT 188
Query: 506 KGVSPPYFQVNDESQAS 456
Q D S A+
Sbjct: 189 ASPGQTAGQATDHSDAT 205
>UniRef50_A7RPE6 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1263
Score = 34.3 bits (75), Expect = 3.4
Identities = 23/76 (30%), Positives = 29/76 (38%)
Frame = -1
Query: 716 PXASSTXPXXXXTSTRSSNPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSA 537
P ST ST S+ TP+ P S+ P TP L P++ PS
Sbjct: 1010 PSTPSTPSTPSTPSTPSTPSTPSTPSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPST 1069
Query: 536 YLTPSSLGMXKGVSPP 489
TPS+ M S P
Sbjct: 1070 PSTPSTPSMPSTPSTP 1085
>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
domain-containing protein 13B. - Takifugu rubripes
Length = 634
Score = 33.9 bits (74), Expect = 4.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 259 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 146
PSC F PP TVL R L++++ LL +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -3
Query: 690 DXGYINPIIKSPIPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSI 541
D Y+NP+IK + Y + P+L ++ + D G A A+V++ G +
Sbjct: 1919 DLSYLNPVIKDSVSYVDTPKLTLN---ASDPTGSGSTATTVATVLVSGKL 1965
>UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus
elongatus|Rep: Tll0286 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 158
Score = 33.1 bits (72), Expect = 8.0
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -2
Query: 460 LRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALKVSSIIG 281
L LL+VIP L P +H +I + A NQ ++ + + DN T + + +
Sbjct: 8 LLLLLLVIPLWLAVSPRSHAMIRTIEEAPNQVVVQSRHPLRDNRGFTWQVILFSRPDQLQ 67
Query: 280 TRVYVFDPSCYFSTP 236
R+ F +F P
Sbjct: 68 LRLVGFPEQYHFRHP 82
>UniRef50_Q0V1A0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1581
Score = 33.1 bits (72), Expect = 8.0
Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 2/99 (2%)
Frame = -1
Query: 749 PXSXXIIXGVXPXASSTXPXXXXTST--RSSNPRFHTPTTPDLTSISINPLTPX*KEFAP 576
P S + P SS P + + S+ P + P+ S P + AP
Sbjct: 565 PVSTQLPPSDAPPTSSQPPGSASSDSPPASTQPSWSAPSDSRPAS---QPASSQPSGSAP 621
Query: 575 GLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQA 459
PP SSEAPS+ + L SPP SQA
Sbjct: 622 SSAPPASSEAPSSAPPSTQLASSDAPSPPASSAQGSSQA 660
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,385,492
Number of Sequences: 1657284
Number of extensions: 13728355
Number of successful extensions: 41967
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 39293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41688
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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