Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_D05
(785 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical p... 50 2e-06
DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like... 50 2e-06
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen prot... 29 5.0
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 28 8.7
U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical pr... 28 8.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 8.7
>Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical
protein K07A1.8 protein.
Length = 492
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Frame = -1
Query: 770 DVIHFLTTXFXSTQQ---PGTQQISSDEQQKLSXXXXXXXXXXXXXXXXYRKEHPDEVRD 600
DV+ F + QQ P +QI E+QK ++++HPD+V++
Sbjct: 240 DVLDFSVFSLFNEQQKPVPVAEQIPQQEKQKYDEEFERQMKEYEQERAKFKEQHPDKVKE 299
Query: 599 KDGEFDD--WFESDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQMNSIS 450
D E+D ++E RELR I++ Q IH V++++++++ ++ Q + ++
Sbjct: 300 DD-EYDPNKYYEDATARELRLIYESQNAIHQVMQNMDQRLAQIQQAQTSGVA 350
>DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like
protein protein.
Length = 492
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Frame = -1
Query: 770 DVIHFLTTXFXSTQQ---PGTQQISSDEQQKLSXXXXXXXXXXXXXXXXYRKEHPDEVRD 600
DV+ F + QQ P +QI E+QK ++++HPD+V++
Sbjct: 240 DVLDFSVFSLFNEQQKPVPVAEQIPQQEKQKYDEEFERQMKEYEQERAKFKEQHPDKVKE 299
Query: 599 KDGEFDD--WFESDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQMNSIS 450
D E+D ++E RELR I++ Q IH V++++++++ ++ Q + ++
Sbjct: 300 DD-EYDPNKYYEDATARELRLIYESQNAIHQVMQNMDQRLAQIQQAQTSGVA 350
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = -1
Query: 620 HPDEVRDKDGEFDDWFESDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQMNSISMLT 441
HP VR + +DD++ + Q+E + +++ D++ VD+++GK M+ + L+
Sbjct: 2872 HPKPVRTET-HYDDYYITSLQQE--DLDATDSEVDGENLDVSTFVDDILGKSMDEAAFLS 2928
Query: 440 AVYS 429
+ S
Sbjct: 2929 STKS 2932
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = -1
Query: 620 HPDEVRDKDGEFDDWFESDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQMNSISMLT 441
HP VR + +DD++ + Q+E + +++ D++ VD+++GK M+ + L+
Sbjct: 2872 HPKPVRTET-HYDDYYITSLQQE--DLDATDSEVDGENLDVSTFVDDILGKSMDEAAFLS 2928
Query: 440 AVYS 429
+ S
Sbjct: 2929 STKS 2932
>AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen protein
88 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 390 DPSTDAEYADRPPRLGRAGGQQSAHDQHHSR 298
+P TDAEY PPR G + + ++ + R
Sbjct: 265 EPGTDAEYCQCPPRTGAIEVEPATQEEGYKR 295
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 575 FESDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQ 465
FE+ ++ Q Q QI ++LR LN+K EV+ KQ
Sbjct: 76 FEATVSEIQEKLPQRQKQIDEILRALNEKRREVLQKQ 112
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 55 AATSRMAVKLAQVAAGHGGGA 117
A TS+M LA+++A HGGGA
Sbjct: 3411 ADTSQMTAHLAKLSAEHGGGA 3431
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 55 AATSRMAVKLAQVAAGHGGGA 117
A TS+M LA+++A HGGGA
Sbjct: 3411 ADTSQMTAHLAKLSAEHGGGA 3431
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical protein
C08B11.3 protein.
Length = 1244
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 141 EANGPGAGSPAPVSCRDLR*FHRHPAGGRHAISAH-VHIC 25
EA GP S SC LR R+ A GR + H HIC
Sbjct: 1068 EAEGPVTKSIRLTSCLILRNLARYSAEGRQKLRRHESHIC 1107
>U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical
protein F52C9.5 protein.
Length = 618
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 614 DEVRDKDGEFDDWFE-SDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQM 462
++V + +++ W E DG++ R+I QI D ++ VDE+ M
Sbjct: 471 EDVEEDGSKWESWSECQDGKQTRRKICANFNQIEDCAEEVRDCVDEIDSTDM 522
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 55 AATSRMAVKLAQVAAGHGGGA 117
A TS+M LA+++A HGGGA
Sbjct: 3411 ADTSQMTAHLAKLSAEHGGGA 3431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,141,969
Number of Sequences: 27780
Number of extensions: 252398
Number of successful extensions: 777
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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