Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_C19
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81097-10|CAB03169.1|  492|Caenorhabditis elegans Hypothetical p...    37   0.014
DQ384615-1|ABD34785.1|  492|Caenorhabditis elegans ERGIC-53-like...    37   0.014
AF040660-2|AAC71147.1|  302|Caenorhabditis elegans Collagen prot...    29   5.0  
Z81586-5|CAB04696.1|  484|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U39850-1|AAA81055.3|  618|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    28   8.8  

>Z81097-10|CAB03169.1|  492|Caenorhabditis elegans Hypothetical
           protein K07A1.8 protein.
          Length = 492

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/58 (29%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = -2

Query: 620 PDEVRDKDGEFDD--WFESDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQMNSIS 453
           PD+V++ D E+D   ++E    RELR I++ Q  IH V++++++++ ++   Q + ++
Sbjct: 294 PDKVKEDD-EYDPNKYYEDATARELRLIYESQNAIHQVMQNMDQRLAQIQQAQTSGVA 350


>DQ384615-1|ABD34785.1|  492|Caenorhabditis elegans ERGIC-53-like
           protein protein.
          Length = 492

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/58 (29%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = -2

Query: 620 PDEVRDKDGEFDD--WFESDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQMNSIS 453
           PD+V++ D E+D   ++E    RELR I++ Q  IH V++++++++ ++   Q + ++
Sbjct: 294 PDKVKEDD-EYDPNKYYEDATARELRLIYESQNAIHQVMQNMDQRLAQIQQAQTSGVA 350


>AF040660-2|AAC71147.1|  302|Caenorhabditis elegans Collagen protein
           88 protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 393 DPSTDAEYADRPPRLGRAGGQQSAHDQHHSR 301
           +P TDAEY   PPR G    + +  ++ + R
Sbjct: 265 EPGTDAEYCQCPPRTGAIEVEPATQEEGYKR 295


>Z81586-5|CAB04696.1|  484|Caenorhabditis elegans Hypothetical
           protein T05F1.7 protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -2

Query: 578 FESDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQ 468
           FE+       ++ Q Q QI ++LR LN+K  EV+ KQ
Sbjct: 76  FEATVSEIQEKLPQRQKQIDEILRALNEKRREVLQKQ 112


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 56   AATSRMAVKLAQVAAGHGGGA 118
            A TS+M   LA+++A HGGGA
Sbjct: 3411 ADTSQMTAHLAKLSAEHGGGA 3431


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 56   AATSRMAVKLAQVAAGHGGGA 118
            A TS+M   LA+++A HGGGA
Sbjct: 3411 ADTSQMTAHLAKLSAEHGGGA 3431


>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical protein
            C08B11.3 protein.
          Length = 1244

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 142  EANGPGAGSPAPVSCRDLR*FHRHPAGGRHAISAH-VHIC 26
            EA GP   S    SC  LR   R+ A GR  +  H  HIC
Sbjct: 1068 EAEGPVTKSIRLTSCLILRNLARYSAEGRQKLRRHESHIC 1107


>U39850-1|AAA81055.3|  618|Caenorhabditis elegans Hypothetical
           protein F52C9.5 protein.
          Length = 618

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 617 DEVRDKDGEFDDWFE-SDGQRELRQIFQGQAQIHDVLRDLNKKVDEVIGKQM 465
           ++V +   +++ W E  DG++  R+I     QI D   ++   VDE+    M
Sbjct: 471 EDVEEDGSKWESWSECQDGKQTRRKICANFNQIEDCAEEVRDCVDEIDSTDM 522


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 56   AATSRMAVKLAQVAAGHGGGA 118
            A TS+M   LA+++A HGGGA
Sbjct: 3411 ADTSQMTAHLAKLSAEHGGGA 3431


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,884,525
Number of Sequences: 27780
Number of extensions: 241102
Number of successful extensions: 778
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)