Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_C12
(805 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.089
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 34 0.12
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 34 0.12
SB_37672| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 0.83
SB_10487| Best HMM Match : FGF (HMM E-Value=1.4e-06) 31 1.1
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 31 1.1
SB_48094| Best HMM Match : MMR_HSR1 (HMM E-Value=0.82) 31 1.4
SB_21242| Best HMM Match : Prog_receptor (HMM E-Value=0.79) 31 1.4
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_10368| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0) 29 4.4
SB_40494| Best HMM Match : fn3 (HMM E-Value=9.2e-21) 29 4.4
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9) 29 4.4
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_57111| Best HMM Match : Drf_FH1 (HMM E-Value=3.3) 29 5.8
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 5.8
SB_32103| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 5.8
SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016) 29 5.8
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 29 5.8
SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 28 7.7
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8) 28 7.7
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_28534| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 28 7.7
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 38.3 bits (85), Expect = 0.007
Identities = 39/120 (32%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Frame = +3
Query: 312 HLRENPEGRHFGRYTVGGAQEP--PCTAPPPDRQSSTGRPRTRHLIVPTGAERELHARA- 482
H + P G + R GA P P PP R G P R + T +R ++RA
Sbjct: 598 HPKVPPPGAPYQRLPYSGAYHPRLPPPGPPYQRVPPPGAPIQRVPLPETHHQRVPYSRAT 657
Query: 483 --GHPAFR-AEVLKRDPTPFHAPQPHGTPL-PGHKTWPWPPTSPD-PLTCGRRQPAMRGF 647
G P+ R V R P A P +PL P T PP +P P R QP GF
Sbjct: 658 HHGEPSPRIPTVTPRVPISPLAESPQKSPLEPVTATQMTPPVAPRVPPPSPRMQPPASGF 717
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 36.7 bits (81), Expect = 0.022
Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 7/101 (6%)
Frame = +3
Query: 363 GAQEPPCTAPPPDRQSSTGRPR----TRHLIV---PTGAERELHARAGHPAFRAEVLKRD 521
GA P PPP S G P RH P GA + G P +
Sbjct: 2131 GAPARPAMGPPPMGSSRYGPPPPMGPARHSPSGPSPLGAPPSVPPPMGAPPSGPPPMGAP 2190
Query: 522 PTPFHAPQPHGTPLPGHKTWPWPPTSPDPLTCGRRQPAMRG 644
P+ P P GTP GH PP P P G PA RG
Sbjct: 2191 PS---GPPPMGTPPSGHPPMGAPPMGPPP--SGSHSPAPRG 2226
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +3
Query: 378 PCTAPPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQPHGT 557
P + PPP +G P P+G +GHP A + P+ H+P P GT
Sbjct: 2170 PPSVPPPMGAPPSGPPPMG--APPSGPPPMGTPPSGHPPMGAPPMGPPPSGSHSPAPRGT 2227
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 34.7 bits (76), Expect = 0.089
Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 10/207 (4%)
Frame = +3
Query: 81 TPAPPERKRGTRRSSTSP-NSSQETTP*KRRAK--HLPRRXXXXXXXXXXXXXXXXXIRY 251
+P+PP R+R + +S P SS P ++RA PRR R
Sbjct: 927 SPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARRKVASPEEQDRQKSNGRN 986
Query: 252 RSARRKSAFAGTRPDDKT-GFHLRENPEGRHFGRYTVGGAQEPPCTAPPPDRQSSTGRPR 428
+ SA T+ ++ + +PE GR + ++ +P +SS RPR
Sbjct: 987 SRSVSPSAVKRTKGSKRSESRSVSRSPERDRKGRDSAKKERQSHSESPQRVTKSSKERPR 1046
Query: 429 TRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQPHGTPLPGHKTWPWPP----- 593
R P RE + P R+ + P+P P+ G + P PP
Sbjct: 1047 KR----PRHQSRERRPSSSPPR-RSRPQRTSPSPRRTPEDRRRS-RGSRRSPSPPKREPR 1100
Query: 594 -TSPDPLTCGRRQPAMRGFSPAPRRDL 671
SP + RR+ R S +P+R++
Sbjct: 1101 RRSPS-ASPPRREARKRSLSRSPKREV 1126
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 34.3 bits (75), Expect = 0.12
Identities = 34/115 (29%), Positives = 41/115 (35%), Gaps = 1/115 (0%)
Frame = +3
Query: 354 TVGGAQEPPCTAPPPDRQSSTGRPRTRHLIVPT-GAERELHARAGHPAFRAEVLKRDPTP 530
T GG PP APPP ++ S+ P PT G G P RD P
Sbjct: 258 TSGGEPPPPKNAPPPPKRGSSNPPPP-----PTRGPPSNSFTTQGPPL----PPSRDQAP 308
Query: 531 FHAPQPHGTPLPGHKTWPWPPTSPDPLTCGRRQPAMRGFSPAPRRDLAASAPNAG 695
P + TP P + P P PL G+ P S P +A P G
Sbjct: 309 APPPPLNATPPPPPPSRDQVPLPPPPLR-GQIAPPPPPISKPPTSTRSAPPPPPG 362
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 34.3 bits (75), Expect = 0.12
Identities = 34/115 (29%), Positives = 41/115 (35%), Gaps = 1/115 (0%)
Frame = +3
Query: 354 TVGGAQEPPCTAPPPDRQSSTGRPRTRHLIVPT-GAERELHARAGHPAFRAEVLKRDPTP 530
T GG PP APPP ++ S+ P PT G G P RD P
Sbjct: 170 TSGGEPPPPKNAPPPPKRGSSNPPPP-----PTRGPPSNSFTTQGPPL----PPSRDQAP 220
Query: 531 FHAPQPHGTPLPGHKTWPWPPTSPDPLTCGRRQPAMRGFSPAPRRDLAASAPNAG 695
P + TP P + P P PL G+ P S P +A P G
Sbjct: 221 APPPPLNATPPPPPPSRDQVPLPPPPLR-GQIAPPPPPISKPPTSTRSAPPPPPG 274
>SB_37672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 31.9 bits (69), Expect = 0.63
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 300 KTGFHLRENPEGRHFGRYTVGGAQEPPCTAPPPDRQSSTGRPRTRHLIVPT-GAERELHA 476
+TG R N R T A++P A PPD + +T R R + T A R+
Sbjct: 166 RTGPDNRGNTRSRQATAATRSSARQPRQHAQPPDNRGNTHR---RQITAATCAAARQPRQ 222
Query: 477 RAGHPAFRAEVLK-RDPTPFHAPQ 545
A PA R + + + TP H Q
Sbjct: 223 HAQEPAIRGNMHRHQTTTPHHMCQ 246
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.9 bits (69), Expect = 0.63
Identities = 27/99 (27%), Positives = 38/99 (38%)
Frame = +3
Query: 390 PPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQPHGTPLPG 569
PPP + + +PR H + G +L P + P + P P G P P
Sbjct: 428 PPPPQHTGPPQPRPPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPP-PRGFPPP- 485
Query: 570 HKTWPWPPTSPDPLTCGRRQPAMRGFSPAPRRDLAASAP 686
P+ P P P G P RG P PR+ + + P
Sbjct: 486 ----PFGP--PPPFYRG--PPPPRGMPPPPRQRMPSQGP 516
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +1
Query: 199 PTKPHRAPPHRLHQTYGTAVRAESPPSPVPVLMIRRDFISGKIPKDVISGDTPWAAHRSH 378
PT + PH LH+ + SPP+P V++ + P S P + HR H
Sbjct: 22 PTPCYGITPHPLHRHHLPPPATASPPTPCIVIISHP--LHRHHPPPPASSSFPHSLHRHH 79
Query: 379 LAPP 390
PP
Sbjct: 80 PPPP 83
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 31.5 bits (68), Expect = 0.83
Identities = 36/130 (27%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Frame = +1
Query: 184 PAERLPTKPHRAPPHRLHQTYGTAVRAESPP-SPVPVLMIRRDFISGKI---PKDVI--- 342
P+ +PT PP + G +PP +P P + + + P V
Sbjct: 428 PSSGVPTPVAAPPPSVFASSSGVPTPVTAPPPAPPPSVFAPSSGVPTPVAAPPPSVFAPS 487
Query: 343 SG-DTPWAAHRSHLAPPHHRTDSRV---PGAPAPAT**SLRGLSGSFT-PAPAIPPSALR 507
SG TP AA + P + V P AP P+ G+ T P PA PPS
Sbjct: 488 SGVPTPVAAPPPSVFAPSSGVPTTVTAPPAAPPPSVFAPSSGVPTPVTEPPPAPPPSVFA 547
Query: 508 C*RGIPLPFT 537
G+P P T
Sbjct: 548 PSSGVPTPVT 557
>SB_10487| Best HMM Match : FGF (HMM E-Value=1.4e-06)
Length = 617
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +3
Query: 252 RSARRKSAFAGTRPDDKTGFHLRENPEGRHFG--RYTVGGAQEPPCTAPPPDRQSSTGRP 425
R +RR S++A RP + P GR+ R + ++ P CT S R
Sbjct: 307 RLSRRSSSYATKRPSGSPQIPPKSTPSGRYLKDFRQSTDQSRRPKCTRVKTTTSGSEMRL 366
Query: 426 RTRHL 440
RHL
Sbjct: 367 TKRHL 371
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 540 PQPHGTPLPGHKTWPWPPTSPDPLTCGRRQPAMRGFSPA---PRRDLAASAP 686
P P P PG+ +PPT P P T QP G +P P++ A + P
Sbjct: 177 PPPQAYPQPGYPPQGYPPTGPYPQT----QPGYAGATPQAHYPQQPYAGAQP 224
>SB_48094| Best HMM Match : MMR_HSR1 (HMM E-Value=0.82)
Length = 896
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +3
Query: 423 PRTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTP 530
PR+RH TG E R HP R VL RD TP
Sbjct: 460 PRSRHPPRTTGPELACPNRLPHPTRRPGVLYRDRTP 495
>SB_21242| Best HMM Match : Prog_receptor (HMM E-Value=0.79)
Length = 1091
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = -3
Query: 515 LQHLSAEGGMAGAGVKLPLSPRRDYQVAGAGAPGTRLSVRWWGGARWLLCAAHGVSPEMT 336
L H ++G +A V+ P +PR+ Y V G + VR +R SP
Sbjct: 455 LDHTRSKGPIANGDVRQPTTPRKTYSVVYQGNKDDAIPVRVSSMSRTDHDRVDNYSPTDD 514
Query: 335 SFGIFPEMKSRLIIRTG 285
++ ++SR +R G
Sbjct: 515 TYSRSSTLQSRADLRRG 531
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 489 PAFRAEVLKRDPTPFHAPQPHGTPLPGHKTWPWPPTSPDPLTCGRRQPAMRGFSPAPRRD 668
P F +E R TP AP PH + T+ + P + +Q A+ +P R++
Sbjct: 704 PVFISETSPRVKTPSSAPLPHSSTRTVGFTYKLDGSITSPTSPPTKQIAISSNAPKVRQE 763
Query: 669 LAASAP 686
+ S P
Sbjct: 764 VELSRP 769
>SB_10368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 29.5 bits (63), Expect = 3.3
Identities = 40/110 (36%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Frame = +3
Query: 378 PCTAP-PPDRQSSTGRP----RTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAP 542
P P P R S RP R I P A R L A PA R P P P
Sbjct: 184 PAMRPLPAMRPLSAMRPLPAMRPLPAIRPVPAMRPLPAMPPVPAMR-------PLPAMRP 236
Query: 543 QPHGTPLPGHKTWPWPPTSP--DPLTCGRRQPAMRGFSPAPRRDLAASAP 686
P PLP + P P P PL R PAMR PA R L A P
Sbjct: 237 LPAMRPLPAMRPLPAMPPLPAMRPLPAMRPLPAMRPL-PA-MRPLPAMPP 284
Score = 29.5 bits (63), Expect = 3.3
Identities = 36/109 (33%), Positives = 38/109 (34%), Gaps = 2/109 (1%)
Frame = +3
Query: 366 AQEPPCTAPPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQ 545
A P PP R + P A R L A PA R P P P
Sbjct: 215 AMRPLPAMPPVPAMRPLPAMRPLPAMRPLPAMRPLPAMPPLPAMR-------PLPAMRPL 267
Query: 546 PHGTPLPGHKTWPWPPTSP--DPLTCGRRQPAMRGFSPAPRRDLAASAP 686
P PLP + P P P PL R PAMR PA R L A P
Sbjct: 268 PAMRPLPAMRPLPAMPPLPAMRPLPAMRPLPAMRPL-PA-MRPLPAMRP 314
>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 759
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +3
Query: 375 PPCTAPPPDRQ-SSTGRP--RTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQ 545
PP T PPP R STG RT + + T A R L + A R V R + + +
Sbjct: 118 PPITNPPPTRNLGSTGSSDNRTHYRRIETKAPRRLEPLKPNTASRTSVKPRIVSVYRNGK 177
Query: 546 P 548
P
Sbjct: 178 P 178
>SB_40494| Best HMM Match : fn3 (HMM E-Value=9.2e-21)
Length = 600
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 522 PTPFHAPQPHGTPLPGHKTWPWPPTSPDPLTCG 620
PTPF+ P PH PL WP P L CG
Sbjct: 568 PTPFYGPVPH--PL----LWPCAPPPATALLCG 594
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 444 VPTGAERELHARAGHPAF-RAEVLKRDPTPFHAPQPHGTPLPGHKTW 581
VP GA R + + G P F + V K D T +AP+ H T G K W
Sbjct: 366 VPVGA-RVIASFQGRPNFYKGRVTKIDSTNHYAPRYHVTYDDGDKGW 411
>SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9)
Length = 297
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 486 HPAFRAEVLKRDPTPFHAPQPHGTPLPGHKTWPWPPTSPDPL-TCGRRQPAMRGFSPAP 659
+PA+ A+ P+ P + +P P+PP +P P T +P+++ +S P
Sbjct: 148 NPAYNADGCTSGPSQETGPVHNQQDMPLADLAPYPPDAPPPYHTVALNKPSLQPYSQMP 206
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/78 (29%), Positives = 30/78 (38%)
Frame = +3
Query: 375 PPCTAPPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQPHG 554
PP PP + S P +R P+ E E+ A G P + + P P P+P
Sbjct: 178 PPKEMPPQPAEESRTPPGSRSTPEPSLEEPEVSA-MGTPVSTPQATVQTPPP--PPEPSN 234
Query: 555 TPLPGHKTWPWPPTSPDP 608
P K P SP P
Sbjct: 235 EPSTSSK----PKASPSP 248
>SB_57111| Best HMM Match : Drf_FH1 (HMM E-Value=3.3)
Length = 451
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +1
Query: 277 SPVPVLMIRRDFISGKIPKDVISGDTPWAAHRSHLAPPHH----RTDSRVPGAPAPAT** 444
+PV R + + + +SG+ PWA + L PP VP A P
Sbjct: 185 NPVQASQTRPTVVPSTLFQGQLSGNMPWAIQYATLKPPMTGNPITVGPNVPYAVIPNPGV 244
Query: 445 SLRGLSGSFTPAPAIP 492
L L+ + P PA+P
Sbjct: 245 PLAPLAANQMPYPALP 260
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Frame = +3
Query: 363 GAQEPPCTAPPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTP--FH 536
G EP T+ PP +++T +P T+ P + P + PTP
Sbjct: 152 GTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPPTPPAPP-SPPIPTAPPTPPMPE 210
Query: 537 APQPHGTP-LPGHKTWPW-PPTSPDP 608
P P G+P +P P PP P+P
Sbjct: 211 TPLPPGSPHIPPAPLHPHIPPAPPNP 236
>SB_32103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 28.7 bits (61), Expect = 5.8
Identities = 32/130 (24%), Positives = 45/130 (34%)
Frame = +3
Query: 246 RYRSARRKSAFAGTRPDDKTGFHLRENPEGRHFGRYTVGGAQEPPCTAPPPDRQSSTGRP 425
RY + + PD + NP G+ + PP TAP PD R
Sbjct: 105 RYHDKSKIPPWTAPEPDPPVDSAIARNPRGQCQSKI-------PPWTAPEPDFLIDRARA 157
Query: 426 RTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQPHGTPLPGHKTWPWPPTSPD 605
R G +R+ E K P+ A +P+ P+ +K PW PD
Sbjct: 158 RYH------GGKRQSQ-------IPREQRKSQIPPWTAQKPY-PPVDKYKIAPWTAPEPD 203
Query: 606 PLTCGRRQPA 635
L R P+
Sbjct: 204 FLVDRARSPS 213
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 513 KRDPTPFHAPQPHGTPLPGHKTWPWPPTSPDPLTCGRRQP 632
K TP P P P PG + PP P PL G P
Sbjct: 651 KEAATPEAGPPPPPPPPPGGQAGGAPPPPPPPLPGGAAPP 690
>SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 528 PFHAPQPHGTPLPGHKTWPWPPTSPDPLTC 617
P+H P+ P TWP+ T P +TC
Sbjct: 724 PYHITCPYDITWPYDITWPYDITCPYDITC 753
>SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)
Length = 419
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/73 (27%), Positives = 26/73 (35%)
Frame = +3
Query: 384 TAPPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQPHGTPL 563
++PPP R S T HL PTG + + H R ++ T Q P
Sbjct: 245 SSPPPPRDSQTNN----HLFPPTGQSDKQSSPPPHGTVRQTIISSSLTGQSDKQSSPPPS 300
Query: 564 PGHKTWPWPPTSP 602
G P T P
Sbjct: 301 RGQSDKQSPSTPP 313
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 516 RDPTPFHAPQPHGTPLPGHKTWPWPPTSPDPLTCGRRQPAMRGFSPAPRRDLAAS-APNA 692
+ P AP P P P + P +P P+ + PA SP+P++ +A S AP +
Sbjct: 179 QSPAVMRAPTPAPHPSPASQ-----PVAPSPVCIPVQSPAPNMMSPSPQQFIAQSPAPTS 233
>SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 5/88 (5%)
Frame = +3
Query: 360 GGAQEPPCTAPPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPA-----FRAEVLKRDP 524
G + P PP R + GRP+ + + E E + G A FR + K
Sbjct: 327 GRFESPAPQQAPPSRFAGGGRPQPKSFLPNKNEEMEPPKKLGSVADRMAYFRQQAAKEQK 386
Query: 525 TPFHAPQPHGTPLPGHKTWPWPPTSPDP 608
+ P P P PP SP P
Sbjct: 387 AASTSMPVKKVPAPVSPAQPTPP-SPGP 413
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 160 EKGARSTCPAERLPTKPHRAPPHRLH-QTYGTAVRAESPPSPVP 288
E+ + PAER + P R PP LH + +PP P+P
Sbjct: 1570 ERRTPTPVPAERRVSPPSRLPPPSLHIRPSDRPGMTATPPPPLP 1613
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -2
Query: 756 TXGCHQCGHPDDDAQHALETCPRWEHSRRDLVAVLGRNLSLRAVVARMLED-QGSWEAMA 580
T C Q G +D L W +R+D V+ NL + M++ GSW+ A
Sbjct: 418 TEMCRQIGCSGEDLAQTLSNVLDWFQTRKDYWCVVVDNLDASELSEEMMKFLNGSWKRSA 477
>SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8)
Length = 625
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 398 RWWGGARWLLCAAHGVSPEMTSFGIFPEMKSRLIIRTGT 282
RW G L G S TS G+F E+K+ R GT
Sbjct: 476 RWVGDTEESLETKRGKSKNETSHGVFSEVKTSRFPRRGT 514
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 492 AFRAEVLKRDPTPFHAPQPHGTPLPGHKTWP 584
+FR L+ D P P+ HG+ H+ WP
Sbjct: 1587 SFRVYPLEEDTRPDDVPRLHGSHQETHRKWP 1617
>SB_28534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 375 PPCTAPPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPA 494
P T PP +++S R RT H VP G +R PA
Sbjct: 26 PATTTKPPFKRTSVTRDRTSH--VPNGLSHVTQSRQRSPA 63
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Frame = +3
Query: 501 AEVLKRDPTPFHAPQPHG------TPLPGHKTWPWPPTSPDPLTCGRRQPAMRGFSPAP 659
+E++ P P P G P PGH P P P G +QP G++P P
Sbjct: 150 SELMSEPPPPGTQPPGQGGYPGYNQPPPGHYPAPGQPGGYYPPPGGYQQPPPGGYAPPP 208
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 KRDPTPFH-APQPHGTPLPGHKTWPWPPTSPDPLTCGRRQPAMRGFSPAPRRDLAASAP 686
K P P AP P P P PP PDP+ P P PR+ AP
Sbjct: 1061 KPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAHPT----EPPPRQPKPTPAP 1115
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Frame = +3
Query: 375 PPCTAPPPDRQSSTGRPRTRHLIVPTGAERELHARAGHPAFRAEVLKRDPTPFHAPQPHG 554
PP PP RQ P T + P + HP E R P P AP+P
Sbjct: 1065 PPSEPAPPPRQPPP--PSTSQPVPPPRQPDPIPTNPAHPT---EPPPRQPKPTPAPRPRS 1119
Query: 555 -TPLPGHKTWPWPPTSPDP 608
P PP P P
Sbjct: 1120 WVESQPELHRPPPPIKPKP 1138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,747,810
Number of Sequences: 59808
Number of extensions: 708340
Number of successful extensions: 2519
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2458
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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