Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_C06
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 380  LSTATISIRSSWRIPYSPNFVEARFVAQY 466
            L  +T SI +SW+ P  PN +   +   Y
Sbjct: 1210 LVMSTDSILASWKPPVEPNGIVEYYTVYY 1238


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 296 TKVNVLKPKTPRPS 337
           TKV+  KP+ PRP+
Sbjct: 258 TKVSRRKPRPPRPT 271


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -3

Query: 84  CKIWFLCESER 52
           C+++++CE ER
Sbjct: 931 CRMYYMCEGER 941


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = -2

Query: 502 PYPDDPGLNVGQ----ILSNEPGFYKVRGIRNSPRRSNR 398
           P P D  L+       IL+   GF+ V+G+R    RS R
Sbjct: 9   PVPGDKNLHKSYSKMLILAQIFGFFPVQGVRGPDFRSLR 47


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = -2

Query: 502 PYPDDPGLNVGQ----ILSNEPGFYKVRGIRNSPRRSNR 398
           P P D  L+       IL+   GF+ V+G+R    RS R
Sbjct: 9   PVPGDKNLHKSYSKMLILAQIFGFFPVQGVRGPDFRSLR 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,622
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)