Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_C06
         (806 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g05350.1 68416.m00583 aminopeptidase P, cytosolic, putative s...    81   1e-15
At4g36760.1 68417.m05216 aminopeptidase P similar to Xaa-Pro ami...    69   3e-12
At4g36760.2 68417.m05215 aminopeptidase P similar to Xaa-Pro ami...    50   2e-06
At5g17780.1 68418.m02085 hydrolase, alpha/beta fold family prote...    30   2.1  

>At3g05350.1 68416.m00583 aminopeptidase P, cytosolic, putative
           similar to cytosolic aminopeptidase P from [Homo
           sapiens] GI:8489879, [Rattus norvegicus] GI:2760920;
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 569

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 40/93 (43%), Positives = 56/93 (60%)
 Frame = -2

Query: 715 TAEQRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXXXLN 536
           +A +++ FTRVL+G I +  A+FP+G  G VLD FAR +LW+                LN
Sbjct: 387 SAREKECFTRVLQGHIALDQAVFPEGTPGFVLDGFARSSLWKIGLDYRHGTGHGVGAALN 446

Query: 535 VHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYK 437
           VHEGP  +S+R Y +   L  G I+SNEPG+Y+
Sbjct: 447 VHEGPQSISFR-YGNMTPLQNGMIVSNEPGYYE 478



 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = -3

Query: 339 YDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILK 187
           + G   LGF  LT  P Q + +D  +L+D E+ ++N+YH  V + +SP+L+
Sbjct: 501 FGGATYLGFEKLTFFPIQTKMVDVSLLSDTEVDWLNSYHAEVWEKVSPLLE 551


>At4g36760.1 68417.m05216 aminopeptidase P similar to Xaa-Pro
           aminopeptidase 2 [Lycopersicon esculentum] GI:15384991;
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 634

 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 34/96 (35%), Positives = 50/96 (52%)
 Frame = -2

Query: 724 GNXTAEQRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXX 545
           G  +A +++ +T V KG + +G+A FPKG  G  LD  AR  LW+               
Sbjct: 448 GKPSAHEKECYTAVFKGHVALGNARFPKGTNGYTLDILARAPLWKYGLDYRHGTGHGVGS 507

Query: 544 XLNVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYK 437
            L VHEGP  VS+RP   +  L     +++EPG+Y+
Sbjct: 508 YLCVHEGPHQVSFRPSARNVPLQATMTVTDEPGYYE 543



 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 22/71 (30%), Positives = 39/71 (54%)
 Frame = -3

Query: 342 DYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDL 163
           ++  +G L F  +T  P Q + ID + LT  EI ++N YH +  D L+P + +     ++
Sbjct: 565 NFGDKGYLQFEHITWAPYQVKLIDLDELTREEIDWLNTYHSKCKDILAPFMNQ----TEM 620

Query: 162 EWLEGQCIPIT 130
           EWL+    P++
Sbjct: 621 EWLKKATEPVS 631


>At4g36760.2 68417.m05215 aminopeptidase P similar to Xaa-Pro
           aminopeptidase 2 [Lycopersicon esculentum] GI:15384991;
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 519

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/72 (34%), Positives = 35/72 (48%)
 Frame = -2

Query: 724 GNXTAEQRDAFTRVLKGQIMIGSALFPKGVKGNVLDSFARHALWEXXXXXXXXXXXXXXX 545
           G  +A +++ +T V KG + +G+A FPKG  G  LD  AR  LW+               
Sbjct: 448 GKPSAHEKECYTAVFKGHVALGNARFPKGTNGYTLDILARAPLWKYGLDYRHGTGHGVGS 507

Query: 544 XLNVHEGPSGVS 509
            L VHEG +  S
Sbjct: 508 YLCVHEGKTSPS 519


>At5g17780.1 68418.m02085 hydrolase, alpha/beta fold family protein
           low similarity to SP|Q02104 Lipase 1 precursor (EC
           3.1.1.3) (Triacylglycerol lipase) {Psychrobacter
           immobilis}, SP|P27747|ACOC_ALCEU Dihydrolipoamide
           acetyltransferase component of acetoin cleaving system
           (EC 2.3.1.12) [Ralstonia eutropha] {Alcaligenes
           eutrophus}; contains Pfam profile PF00561: hydrolase,
           alpha/beta fold family
          Length = 417

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 691 TRVLKGQIMIGSALFPKGVKGNVLDSFARHALW 593
           + ++K   ++    FP  V+G+VL+  AR  LW
Sbjct: 239 SNIVKSVTLVAPPYFPSSVEGSVLNRIARKRLW 271


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,666,456
Number of Sequences: 28952
Number of extensions: 331198
Number of successful extensions: 933
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1833827200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)